RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 GP2P55259 537 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 TIMM10P62072 90 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TIAL1Q01085 375 aaKnown RBP eCLIP3.01□□□□□ -1.93
UBR3-208ENST00000474426 MEF2BQ02080 365 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 PSG7Q13046 419 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 RUNX3Q13761 415 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 SIX1Q15475 284 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 MST1LQ2TV78 715 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PRSS36Q5K4E3 855 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 DCST2Q5T1A1 773 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TEDDM1Q5T9Z0 273 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 SERTAD4-AS1Q5TG53 156 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 UNQ5815/PRO19632Q6UWF5 114 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 HFE2Q6ZVN8 426 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ZNF547Q8IVP9 402 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 GPR135Q8IZ08 494 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 OR2L13Q8N349 312 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 IL22RA1Q8N6P7 574 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 NFAM1Q8NET5 270 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 ZNRF2Q8NHG8 242 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PLPPR1Q8TBJ4 325 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 RAB39BQ96DA2 213 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 IMP4Q96G21 291 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 ADTRPQ96IZ2 230 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 SLC25A31Q9H0C2 315 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 MED29Q9NX70 200 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ZNF629Q9UEG4 869 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 RCL1Q9Y2P8 373 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 KLHDC2Q9Y2U9 406 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TMED3Q9Y3Q3 217 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 RIC1Q4ADV7 1423 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 FER1L4A9Z1Z3 1794 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 EFCAB6Q5THR3 1501 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 E9PCH4 1651 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 SCN4AP35499 1836 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 HYAL3O43820 417 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 PFN1P07737 140 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 GNB3P16520 340 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 AGTR1P30556 359 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PYCR1P32322 319 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 RPL4P36578 427 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 MDH2P40926 338 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 CXCL12P48061 93 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PGFP49763 221 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PDX1P52945 283 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 CLDN2P57739 230 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 FABP5Q01469 135 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 MEF2CQ06413 473 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 RAB40BQ12829 278 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 FAM53BQ14153 422 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 FZD2Q14332 565 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 RHEBQ15382 184 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 MMDQ15546 238 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ELAVL1Q15717 326 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 TP53INP2Q8IXH6 220 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ACVR1CQ8NER5 493 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 OR5AU1Q8NGC0 362 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 OR11G2Q8NGC1 345 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 OR11H7Q8NGC8 314 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 OR6K2Q8NGY2 324 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 OR13C6PQ8NH95 151 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TSLPQ969D9 159 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ZBTB45Q96K62 511 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 ATP5SQ99766 215 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TMEM126AQ9H061 195 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 RNASE7Q9H1E1 156 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 C3orf14Q9HBI5 128 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 SH2D2AQ9NP31 389 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 SPANXA1Q9NS26 97 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 UQCC1Q9NVA1 299 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 FLRT3Q9NZU0 649 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TMED7Q9Y3B3 224 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 A0A1W2PRS3 328 aa3□□□□□ -1.93
UBR3-208ENST00000474426 LRRC30A6NM36 301 aa3□□□□□ -1.93
UBR3-208ENST00000474426 ZNF705GA8MUZ8 300 aaPredicted RBP3□□□□□ -1.93
UBR3-208ENST00000474426 FGF17O60258 216 aa3□□□□□ -1.93
UBR3-208ENST00000474426 HIST1H2BKO60814 126 aa3□□□□□ -1.93
UBR3-208ENST00000474426 TRAPPC6AO75865 159 aa3□□□□□ -1.93
UBR3-208ENST00000474426 AGFG2O95081 481 aa3□□□□□ -1.93
UBR3-208ENST00000474426 HIST1H2BJP06899 126 aa3□□□□□ -1.93
UBR3-208ENST00000474426 CD3EP07766 207 aa3□□□□□ -1.93
UBR3-208ENST00000474426 CD14P08571 375 aa3□□□□□ -1.93
UBR3-208ENST00000474426 OR12D1P0DN82 309 aa3□□□□□ -1.93
UBR3-208ENST00000474426 HIST1H2BOP23527 126 aa3□□□□□ -1.93
UBR3-208ENST00000474426 FASP25445 335 aa3□□□□□ -1.93
UBR3-208ENST00000474426 PRDX3P30048 256 aaKnown RBP3□□□□□ -1.93
UBR3-208ENST00000474426 HIST1H2BBP33778 126 aa3□□□□□ -1.93
UBR3-208ENST00000474426 OPRD1P41143 372 aa3□□□□□ -1.93
UBR3-208ENST00000474426 MAGEA5P43359 124 aa3□□□□□ -1.93
UBR3-208ENST00000474426 ZFP36L2P47974 494 aaKnown RBP3□□□□□ -1.93
UBR3-208ENST00000474426 HIST1H2BDP58876 126 aa3□□□□□ -1.93
UBR3-208ENST00000474426 NCS1P62166 190 aa3□□□□□ -1.93
UBR3-208ENST00000474426 HIST1H2BCP62807 126 aa3□□□□□ -1.93
UBR3-208ENST00000474426 RPS25P62851 125 aaKnown RBP3□□□□□ -1.93
UBR3-208ENST00000474426 SRPXP78539 464 aa3□□□□□ -1.93
UBR3-208ENST00000474426 MYL5Q02045 173 aa3□□□□□ -1.93
UBR3-208ENST00000474426 KLRB1Q12918 225 aa3□□□□□ -1.93
UBR3-208ENST00000474426 DHRS2Q13268 280 aa3□□□□□ -1.93
UBR3-208ENST00000474426 TGIF1Q15583 401 aa3□□□□□ -1.93
UBR3-208ENST00000474426 HIST2H2BEQ16778 126 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms