RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 LRRC19Q9H756 370 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 PATZ1Q9HBE1 687 aaKnown RBP2.53□□□□□ -2
PRPF3-204ENST00000470824 PRSS16Q9NQE7 514 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 ZNF355PQ9NSJ1 428 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 SLC17A7Q9P2U7 560 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 CD300AQ9UGN4 299 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 BZW2Q9Y6E2 419 aaKnown RBP2.53□□□□□ -2
PRPF3-204ENST00000470824 TMEM14AQ9Y6G1 99 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 COMMD3-BMI1R4GMX3 469 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 MYO5AQ9Y4I1 1855 aaKnown RBP2.53□□□□□ -2
PRPF3-204ENST00000470824 COL11A1P12107 1806 aaPredicted RBP2.53□□□□□ -2
PRPF3-204ENST00000470824 PARP14Q460N5 1801 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 ZNF236Q9UL36 1845 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 A0A0G2JMZ2 1700 aa2.53□□□□□ -2
PRPF3-204ENST00000470824 IGKV2D-24A0A075B6R9 120 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 IGHV3OR16-9A0A0B4J2B5 98 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 A0A0U1RQV1 116 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 A0A1W2PPV4 95 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 OR5K4A6NMS3 321 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 ZNF879B4DU55 563 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 H3BQV1 296 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 GOLGA8RI6L899 631 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 DNASE2O00115 360 aaPredicted RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 RAD51BO15315 384 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 BIRC5O15392 142 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 GCM2O75603 506 aaPredicted RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 SNAI1O95863 264 aaPredicted RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 IGKV5-2P06315 115 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 DCNP07585 359 aaKnown RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 KRT7P08729 469 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 CD37P11049 281 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 IGFBP3P17936 291 aaPredicted RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 CFL1P23528 166 aaKnown RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 HTR1DP28221 377 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 GABRR2P28476 465 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 ALDH3A1P30838 453 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 TALDO1P37837 337 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 PPP1R2P41236 205 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 HTR2BP41595 481 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 PFN3P60673 137 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 POLR2GP62487 172 aaKnown RBP eCLIP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 FKBP1AP62942 108 aaKnown RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 UBE2IP63279 158 aaKnown RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 S100A12P80511 92 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 SYCNQ0VAF6 134 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 DMC1Q14565 340 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 MOGQ16653 247 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 TFDP3Q5H9I0 405 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 ZNF691Q5VV52 312 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 MLIPQ5VWP3 458 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 FBXW9Q5XUX1 488 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 FAM71E1Q6IPT2 247 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 PPP1R2P3Q6NXS1 205 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 TMEM205Q6UW68 189 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 NTM-AS1Q6ZSK4 140 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 CDKL3Q8IVW4 592 aaPredicted RBP2.52□□□□□ -2.01
PRPF3-204ENST00000470824 SYCE1Q8N0S2 351 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 KIF2BQ8N4N8 673 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 CSGALNACT2Q8N6G5 542 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 UBAC2Q8NBM4 344 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 TMEM104Q8NE00 496 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 OR10W1Q8NGF6 305 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 OR5AR1Q8NGP9 310 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 OR8U1Q8NH10 309 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 OR10G6Q8NH81 332 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 CLHC1Q8NHS4 586 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 UBALD1Q8TB05 177 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 STARD4Q96DR4 205 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 SGTBQ96EQ0 304 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 CHMP6Q96FZ7 201 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 AGMATQ9BSE5 352 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 C9orf16Q9BUW7 83 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 FBXO44Q9H4M3 255 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 AGPAT3Q9NRZ7 376 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 ADA2Q9NZK5 511 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 IFNKQ9P0W0 207 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 HMGXB4Q9UGU5 601 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 MYH1P12882 1939 aa2.52□□□□□ -2.01
PRPF3-204ENST00000470824 PRRC2AP48634 2157 aaKnown RBP2.51□□□□□ -2.01
PRPF3-204ENST00000470824 CEP290O15078 2479 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 SCN2AQ99250 2005 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 MTCL1Q9Y4B5 1905 aaKnown RBP2.51□□□□□ -2.01
PRPF3-204ENST00000470824 SMIM26A0A096LP01 95 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 IGHV1OR15-9A0A0B4J2B8 117 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 IGHV1-69DA0A0B4J2H0 117 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 IGKV1-8A0A0C4DH67 115 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 GOLGA8QA0A0J9YX86 632 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 A0A1B0GUH1 482 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 TMEM223A0PJW6 202 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 ERICH2A1L162 156 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 CENPXA8MT69 81 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 H3BN98 237 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 SMIM24O75264 130 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 REM1O75628 298 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 SLC22A5O76082 557 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 VAMP5O95183 116 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 APCSP02743 223 aa2.51□□□□□ -2.01
PRPF3-204ENST00000470824 CATP04040 527 aaKnown RBP2.51□□□□□ -2.01
PRPF3-204ENST00000470824 CRYGCP07315 174 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms