RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 RNASEH2CQ8TDP1 164 aaKnown RBP11.77□□□□□ -0.53
SHANK2-214ENST00000468619 APOOQ9BUR5 198 aa11.77□□□□□ -0.53
SHANK2-214ENST00000468619 LYRM4Q9HD34 91 aa11.77□□□□□ -0.53
SHANK2-214ENST00000468619 SUSD2Q9UGT4 822 aa11.77□□□□□ -0.53
SHANK2-214ENST00000468619 LAMA1P25391 3075 aa11.77□□□□□ -0.53
SHANK2-214ENST00000468619 C17orf51A8MQB3 221 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 CRTAPO75718 401 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-214ENST00000468619 ISG15P05161 165 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 CT45A8P0DMV1 189 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 CT45A9P0DMV2 189 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 AKT2P31751 481 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 GNG10P50151 68 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 ZNF117Q03924 483 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 CT45A2Q5DJT8 189 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 TEX38Q6PEX7 206 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 LRP11Q86VZ4 500 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-214ENST00000468619 CARFQ8N187 725 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 HAS2Q92819 552 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 RCC1LQ96I51 464 aaKnown RBP11.76□□□□□ -0.53
SHANK2-214ENST00000468619 C5orf34Q96MH7 638 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 RIMS4Q9H426 269 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-214ENST00000468619 ANAPC10Q9UM13 185 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 MRPS28Q9Y2Q9 187 aaKnown RBP11.76□□□□□ -0.53
SHANK2-214ENST00000468619 NSG1A0A0A6YYJ2 146 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 ZNF878C9JN71 531 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 H0YGG7 62 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 CDC14BO60729 498 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 ZNF205O95201 554 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 WISP1O95388 367 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 CEACAM5P06731 702 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 ARF3P61204 181 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-214ENST00000468619 PAX5Q02548 391 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 COL10A1Q03692 680 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 CHRFAM7AQ494W8 412 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 ALKBH2Q6NS38 261 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 CA13Q8N1Q1 262 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 OR1P1Q8NH06 330 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 RHBDD1Q8TEB9 315 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 HOXB13Q92826 284 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-214ENST00000468619 SCARF2Q96GP6 870 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-214ENST00000468619 ADGRG7Q96K78 797 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 TMEM59Q9BXS4 323 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 WNT16Q9UBV4 365 aa11.76□□□□□ -0.53
SHANK2-214ENST00000468619 MRPS17Q9Y2R5 130 aaKnown RBP11.76□□□□□ -0.53
SHANK2-214ENST00000468619 FAM221AA4D161 298 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 IFNL4K9M1U5 179 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 OMGP23515 440 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 ATP6V0CP27449 155 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 RPL29P47914 159 aaKnown RBP11.75□□□□□ -0.53
SHANK2-214ENST00000468619 LYZL2Q7Z4W2 148 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 OR52M1Q8NGK5 317 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 SLC22A18Q96BI1 424 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 ZNF2Q9BSG1 426 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-214ENST00000468619 CABLES2Q9BTV7 478 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 FGF22Q9HCT0 170 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 ZNF701Q9NV72 531 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-214ENST00000468619 SRPK3Q9UPE1 567 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 IGKV1D-8A0A087WSZ0 117 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 CLDN34H7C241 214 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 TOX3O15405 576 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-214ENST00000468619 SLC35E2P0CK97 266 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 MMP9P14780 707 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 PPM1FP49593 454 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-214ENST00000468619 HNRNPKP61978 463 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■■□ 20.3
SHANK2-214ENST00000468619 H3F3AP84243 136 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 TSPO2Q5TGU0 170 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 SLC35E3Q7Z769 313 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 OR5D14Q8NGL3 314 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 SYT3Q9BQG1 590 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 VN1R1Q9GZP7 353 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 KIAA1456Q9P272 454 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 PADI1Q9ULC6 663 aa11.75□□□□□ -0.53
SHANK2-214ENST00000468619 XKRY2A2RUG3 117 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 ZNF823P16415 610 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 HNRNPA2B1P22626 353 aaKnown RBP11.74□□□□□ -0.53
SHANK2-214ENST00000468619 MMP16P51512 607 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 RPL27P61353 136 aaKnown RBP11.74□□□□□ -0.53
SHANK2-214ENST00000468619 RPL23AP62750 156 aaKnown RBP11.74□□□□□ -0.53
SHANK2-214ENST00000468619 FMODQ06828 376 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 P2RY6Q15077 328 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 DMRTA1Q5VZB9 504 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 FIGLAQ6QHK4 219 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 BTNL3Q6UXE8 466 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 RD3Q7Z3Z2 195 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 DEFB119Q8N690 84 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 BMFQ96LC9 184 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 HIST1H2AAQ96QV6 131 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 DHRS7CA6NNS2 312 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 GCGP01275 180 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 TTRP02766 147 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 H2BFMP0C1H6 154 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 ALDH3B1P43353 468 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 RAB11AP62491 216 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 HERPUD1Q15011 391 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 WDR25Q64LD2 544 aaPredicted RBP11.74□□□□□ -0.53
SHANK2-214ENST00000468619 TMEM123Q8N131 208 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 OR5D18Q8NGL1 313 aa11.74□□□□□ -0.53
SHANK2-214ENST00000468619 C16orf52Q8NHV5 167 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms