RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 MORN5Q5VZ52 161 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 OR4A47Q6IF82 309 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 PPP1R2P3Q6NXS1 205 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 RFPL4BQ6ZWI9 263 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 GPR141Q7Z602 305 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 SLC22A9Q8IVM8 553 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 SKA3Q8IX90 412 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 ABHD12Q8N2K0 398 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 RNF175Q8N4F7 328 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 NRACQ8N912 160 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 SMYD1Q8NB12 490 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 OR9A2Q8NGT5 310 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 OR11L1Q8NGX0 322 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 MYOZ3Q8TDC0 251 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 ST8SIA1Q92185 356 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 H1FXQ92522 213 aaKnown RBP3.48□□□□□ -1.85
HMGB1-207ENST00000468384 PIK3R3Q92569 461 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 GGHQ92820 318 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 RFT1Q96AA3 541 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 ESAMQ96AP7 390 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 UBE2E2Q96LR5 201 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 RIMS4Q9H426 269 aaPredicted RBP3.48□□□□□ -1.85
HMGB1-207ENST00000468384 LRRC40Q9H9A6 602 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 C3orf14Q9HBI5 128 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 RPRD1BQ9NQG5 326 aaKnown RBP3.48□□□□□ -1.85
HMGB1-207ENST00000468384 NDUFA13Q9P0J0 144 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 CHRNA9Q9UGM1 479 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 ATP6V1HQ9UI12 483 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 VSIG4Q9Y279 399 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 HILPDAQ9Y5L2 63 aa3.48□□□□□ -1.85
HMGB1-207ENST00000468384 TRAV18A0A075B6X5 111 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 A0A1B0GVL5 298 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 L7N2F9 121 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 M0R3G1 203 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 SLC28A1O00337 649 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 PSMD3O43242 534 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 SSX5O60225 188 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 SMC2O95347 1197 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 YEATS4O95619 227 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 PTHP01270 115 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 IGHG1P01857 330 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 KRT8P05787 483 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 CHRNGP07510 517 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 GALP22466 123 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 CCNOP22674 350 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 STIP1P31948 543 aaKnown RBP3.47□□□□□ -1.85
HMGB1-207ENST00000468384 NPBWR2P48146 333 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 ETV1P50549 477 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 CCNG1P51959 295 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 SSBP2P81877 361 aaPredicted RBP3.47□□□□□ -1.85
HMGB1-207ENST00000468384 KIAA0141Q14154 515 aaPredicted RBP3.47□□□□□ -1.85
HMGB1-207ENST00000468384 DUSP7Q16829 419 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 FBXO48Q5FWF7 155 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 PAGE2BQ5JRK9 111 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 HIST2H2AA3Q6FI13 130 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 TMEM225Q6GV28 225 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 C8orf74Q6P047 294 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 TTC27Q6P3X3 843 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 UNQ6126/PRO20091Q6UXV3 157 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 KCTD8Q6ZWB6 473 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 STHQ8IWL8 128 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 MNS1Q8NEH6 495 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 OR4K5Q8NGD3 323 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 OR4A16Q8NH70 328 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 NELFBQ8WX92 580 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 PEX13Q92968 403 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 PPP1R14BQ96C90 147 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 SEH1LQ96EE3 360 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 ZBTB18Q99592 522 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 BCL7BQ9BQE9 202 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 PRSS27Q9BQR3 290 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 EFCAB11Q9BUY7 163 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 SCRT1Q9BWW7 348 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 GON7Q9BXV9 100 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 YTHDF1Q9BYJ9 559 aaKnown RBP3.47□□□□□ -1.85
HMGB1-207ENST00000468384 SHCBP1LQ9BZQ2 653 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 CTPS2Q9NRF8 586 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 EIF3KQ9UBQ5 218 aaKnown RBP3.47□□□□□ -1.85
HMGB1-207ENST00000468384 PSORS1C1Q9UIG5 152 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 PSME2Q9UL46 239 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 POFUT2Q9Y2G5 429 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 SH3GLB1Q9Y371 365 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 TMED7Q9Y3B3 224 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 CHTOPQ9Y3Y2 248 aaKnown RBP3.47□□□□□ -1.85
HMGB1-207ENST00000468384 HYOU1Q9Y4L1 999 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 ZNF780BQ9Y6R6 833 aa3.47□□□□□ -1.85
HMGB1-207ENST00000468384 DEFB131BA0A096LNP1 70 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 IQCMA0A1B0GVH7 501 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 FAM230AA0A1W2PPH8 454 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 MFSD2BA6NFX1 497 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 E5RGE8 158 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 F5H5P2 479 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 H0YIV9 168 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 LANCL1O43813 399 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 ATP6V1G1O75348 118 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 OR4F21O95013 312 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 LYPD3O95274 346 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 IGHG4P01861 327 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 ARG1P05089 322 aa3.46□□□□□ -1.86
HMGB1-207ENST00000468384 CLUP10909 449 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms