RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 OR13D1Q8NGV5 346 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 OR5P3Q8WZ94 311 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 RNF170Q96K19 258 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 DHRS1Q96LJ7 313 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 REEP1Q9H902 201 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 BRD7Q9NPI1 651 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 DNAJC27Q9NZQ0 273 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 LRP12Q9Y561 859 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 hCG_1809904A0A1W2PP81 198 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 A0A1W2PPE2 198 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 A0A1W2PR64 198 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 A0A1W2PRV1 198 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 ANXA2P2A6NMY6 339 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 CCL24O00175 119 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 KRT36O76013 467 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 ZNF823P16415 610 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 NOS3P29474 1203 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 CX3CR1P49238 355 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 GPM6AP51674 278 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 C9orf66Q5T8R8 295 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 LCNL1Q6ZST4 164 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 FAM57BQ71RH2 274 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 AMIGO2Q86SJ2 522 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 CAPSLQ8WWF8 208 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 SLAMF6Q96DU3 332 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 KCNJ15Q99712 375 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 FUZQ9BT04 418 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 ANKRD19PQ9H560 264 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 OPA3Q9H6K4 179 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 TBC1D23Q9NUY8 699 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 ARMC1Q9NVT9 282 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 SAMHD1Q9Y3Z3 626 aaKnown RBP11.8□□□□□ -0.52
HDAC6-214ENST00000465269 LYVE1Q9Y5Y7 322 aa11.8□□□□□ -0.52
HDAC6-214ENST00000465269 A0A1W2PPH5 198 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 UNC119BA6NIH7 251 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 JTBO76095 146 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 SPARCP09486 303 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 HOXB6P17509 224 aaKnown RBP11.79□□□□□ -0.52
HDAC6-214ENST00000465269 FASP25445 335 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 OMPP47874 163 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 OR3A4PP47883 348 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 HMGA2P52926 109 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 SLC35F1Q5T1Q4 408 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 SMARCD3Q6STE5 483 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 TMEM179BQ7Z7N9 219 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 ZNF695Q8IW36 515 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 C10orf67Q8IYJ2 551 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 OR4C15Q8NGM1 316 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 PIGCQ92535 297 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 ISOC1Q96CN7 298 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 ZMAT4Q9H898 229 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 LIN7BQ9HAP6 207 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 DNAJB9Q9UBS3 223 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 TMEM5Q9Y2B1 443 aa11.79□□□□□ -0.52
HDAC6-214ENST00000465269 TMEM210A6NLX4 147 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 H3BNX3 289 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 E2F6O75461 281 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 MTRF1O75570 445 aaKnown RBP11.78□□□□□ -0.52
HDAC6-214ENST00000465269 PGA5P0DJD9 388 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 IGHV1-8P0DP01 117 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 ACTA2P62736 377 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 ACTG2P63267 376 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 ACTC1P68032 377 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 ACTA1P68133 377 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 ZNF260Q3ZCT1 412 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 FAM76BQ5HYJ3 339 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 BAIAP2L2Q6UXY1 529 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 EGFL6Q8IUX8 553 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 S100A14Q9HCY8 104 aa11.78□□□□□ -0.52
HDAC6-214ENST00000465269 CCNB2O95067 398 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 PRKACGP22612 351 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 PRDX2P32119 198 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 EIF2B1Q14232 305 aaKnown RBP11.77□□□□□ -0.53
HDAC6-214ENST00000465269 ATP6AP1Q15904 470 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 MICAQ29983 383 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 CEP78Q5JTW2 689 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 ZFP1Q6P2D0 407 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 TCF23Q7RTU1 214 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 PRSS45Q7RTY3 260 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 HS3ST5Q8IZT8 346 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 PROKR2Q8NFJ6 384 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 OR9Q2Q8NGE9 314 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 FANK1Q8TC84 345 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 STMN2Q93045 179 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 AKR1E2Q96JD6 320 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 RBM14Q96PK6 669 aaKnown RBP11.77□□□□□ -0.53
HDAC6-214ENST00000465269 COMMD3-BMI1R4GMX3 469 aa11.77□□□□□ -0.53
HDAC6-214ENST00000465269 ZNF732B4DXR9 585 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 OR2F2O95006 317 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 BAG2O95816 211 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 GASTP01350 101 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 HCKP08631 526 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 ZNF728P0DKX0 622 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 ZNF121P58317 390 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-214ENST00000465269 ACP7Q6ZNF0 438 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 LHFPL2Q6ZUX7 228 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 C16orf82Q7Z2V1 217 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 ZNF511Q8NB15 262 aa11.76□□□□□ -0.53
HDAC6-214ENST00000465269 CSNK2A3Q8NEV1 391 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms