RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 OR6X1Q8NH79 312 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 RNF138Q8WVD3 245 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 RTN4IP1Q8WWV3 396 aaPredicted RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 GTF3AQ92664 365 aaKnown RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 HAS2Q92819 552 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 RAB39BQ96DA2 213 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ZDHHC12Q96GR4 267 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 PGAM5Q96HS1 289 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 BOD1Q96IK1 185 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 LYZL4Q96KX0 146 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 SYT3Q9BQG1 590 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ANGPTL4Q9BY76 406 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 HIPK2Q9H2X6 1198 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 NELFAQ9H3P2 528 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 PRDM13Q9H4Q3 707 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 C11orf1Q9H5F2 150 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ATXN7L1Q9ULK2 861 aaPredicted RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 HSF4Q9ULV5 492 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 RCL1Q9Y2P8 373 aaKnown RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 ATG2AQ2TAZ0 1938 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ZNF587BE7ETH6 402 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 MSTNO14793 375 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 RER1O15258 196 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 RAMP1O60894 148 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 DHRS3O75911 302 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 DIRAS3O95661 229 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 TMEM225BP0DP42 221 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 FBLP22087 321 aaKnown RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 ANOS1P23352 680 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 SFTPDP35247 375 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 TAGLN2P37802 199 aaKnown RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 UCP3P55916 312 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 UBE2KP61086 200 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 SMAD4Q13485 552 aaKnown RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST3H3Q16695 136 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 ZNF674Q2M3X9 581 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 Q3ZCU0 254 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 ZNF506Q5JVG8 444 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 REC114Q7Z4M0 266 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 C6orf201Q7Z4U5 140 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 LYZL2Q7Z4W2 148 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 SLC35E3Q7Z769 313 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 ALPK2Q86TB3 2170 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST3H2BBQ8N257 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 D2HGDHQ8N465 521 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 OR5D18Q8NGL1 313 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 OR10G4Q8NGN3 311 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 Q8WTZ3 238 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 BADQ92934 168 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 CPNE4Q96A23 557 aaPredicted RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 SGK3Q96BR1 496 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 MSI2Q96DH6 328 aaKnown RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 MARS2Q96GW9 593 aaKnown RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 C14orf144Q96I85 54 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 ABHD14BQ96IU4 210 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 MRGPRX4Q96LA9 322 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 RARRES2Q99969 163 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 NUDT22Q9BRQ3 303 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 LIME1Q9H400 295 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 PLEKHJ1Q9NW61 149 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 MMP24Q9Y5R2 645 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 PHF3Q92576 2039 aaKnown RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 FAM230AA0A1W2PPH8 454 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 TCRBV21S2A2A0A5A6 115 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 ZNF724A8MTY0 619 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 B4DEV8 164 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 PPP1R2P9O14990 202 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST1H2BKO60814 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 CDS2O95674 445 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 PTBP3O95758 552 aaKnown RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST1H2BJP06899 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HEXBP07686 556 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 FCGR2AP12318 317 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 MYOGP15173 224 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 GABRG2P18507 467 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST1H2BOP23527 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 MSX1P28360 303 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 CDAP32320 146 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST1H2BBP33778 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 GLIPR1P48060 266 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 CSNK1A1P48729 337 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST1H2BDP58876 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 RND3P61587 244 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 PKIAP61925 76 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 LSM6P62312 80 aaKnown RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST1H2BCP62807 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 SRPXP78539 464 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 NHLH2Q02577 135 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 MYBPHQ13203 477 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 GNMTQ14749 295 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 UBE2V2Q15819 145 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST2H2BEQ16778 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST2H3PS2Q5TEC6 136 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 OGFOD3Q6PK18 319 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 DPPA3Q6W0C5 159 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 CCDC71LQ8N9Z2 235 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 OR2G3Q8NGZ4 309 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 OR14L1PQ8NHC6 308 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST1H2BHQ93079 126 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms