RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SHANK2Q9UPX8 1470 aa2.26□□□□□ -2.05
HMGXB4-205ENST00000464480 HFM1A2PYH4 1435 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SPATA31E1Q6ZUB1 1445 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 RIMS1Q86UR5 1692 aaKnown RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 KBTBD11-OT1A0A1B0GTJ5 212 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 A0A1B0GW55 424 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ISPDA4D126 451 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 GABRR3A8MPY1 467 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SERPINE3A8MV23 424 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SULT1C2O00338 296 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 BHLHE40O14503 412 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 FADS1O60427 444 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 CDC40O60508 579 aaKnown RBP eCLIP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SCN2BO60939 215 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 RP2O75695 350 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 TNFAIP8O95379 198 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SNAI1O95863 264 aaPredicted RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 DUX4L2P0CJ85 424 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 DUX4L3P0CJ86 424 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 DUX4L5P0CJ88 424 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 DUX4L6P0CJ89 424 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 DUX4L7P0CJ90 424 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SLC35E2BP0CK96 405 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ERGP11308 486 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 CCL2P13500 99 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SPI1P17947 270 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SRMP19623 302 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 OR1E1P30953 314 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 MPIP34949 423 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 MAGEA3P43357 314 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 CAPZBP47756 277 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 TGM4P49221 684 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 RBP2P50120 134 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 IDH3GP51553 393 aaPredicted RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 EMP2P54851 167 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ACTBP60709 375 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 COPZ1P61923 177 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 GNG11P61952 73 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 DYNLL1P63167 89 aaKnown RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ACTG1P63261 375 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 RCAN2Q14206 197 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ZNF846Q147U1 533 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ORMDL2Q53FV1 153 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 RNASE10Q5GAN6 216 aaKnown RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 FAM78AQ5JUQ0 283 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 DNLZQ5SXM8 178 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 RESP18Q5W5W9 173 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ZNF470Q6ECI4 717 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ULK3Q6PHR2 472 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 TMEM220Q6QAJ8 160 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 PLET1Q6UQ28 207 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 FBXW12Q6X9E4 464 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 PID1Q7Z2X4 250 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 RBM45Q8IUH3 476 aaKnown RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 C10orf107Q8IVU9 208 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ZBTB8OSQ8IWT0 167 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SELENOHQ8IZQ5 122 aaKnown RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 JAGN1Q8N5M9 183 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 C15orf56Q8N910 161 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 OR9G4Q8NGQ1 327 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 OR13C9Q8NGT0 318 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ZNF420Q8TAQ5 688 aaPredicted RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 NEK7Q8TDX7 302 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 APH1BQ8WW43 257 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 S100ZQ8WXG8 99 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 RAB1CQ92928 201 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 TMBIM1Q969X1 311 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 C12orf43Q96C57 262 aaKnown RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SMIM12Q96EX1 92 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 CAMK2N2Q96S95 79 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 PRRT1Q99946 306 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 MED10Q9BTT4 135 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 MED18Q9BUE0 208 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 PARD6GQ9BYG4 376 aaPredicted RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ACTR3CQ9C0K3 210 aaPredicted RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 IL22Q9GZX6 179 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ASB7Q9H672 318 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 RETNQ9HD89 108 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 TMEM9BQ9NQ34 198 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 NIT2Q9NQR4 276 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 IFNKQ9P0W0 207 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ZNRD1Q9P1U0 126 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 MYEF2Q9P2K5 600 aaKnown RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 DUX4Q9UBX2 424 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 CLN8Q9UBY8 286 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SLC22A13Q9Y226 551 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 WIF1Q9Y5W5 379 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 SAR1BQ9Y6B6 198 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 TMEM14AQ9Y6G1 99 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 MAP3K1Q13233 1512 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 PIK3C2GO75747 1445 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 VPS8Q8N3P4 1428 aa2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 ZNFX1Q9P2E3 1918 aaKnown RBP2.25□□□□□ -2.05
HMGXB4-205ENST00000464480 DNMBPQ6XZF7 1577 aa2.24□□□□□ -2.05
HMGXB4-205ENST00000464480 LMTK2Q8IWU2 1503 aa2.24□□□□□ -2.05
HMGXB4-205ENST00000464480 A0A1B0GV90 55 aa2.24□□□□□ -2.05
HMGXB4-205ENST00000464480 SLC5A10A0PJK1 596 aa2.24□□□□□ -2.05
HMGXB4-205ENST00000464480 LINC00862A6NCI5 91 aa2.24□□□□□ -2.05
HMGXB4-205ENST00000464480 SIGLEC16A6NMB1 481 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms