RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 DHRS3O75911 302 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 IGHV1-8P0DP01 117 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 JUNBP17275 347 aaPredicted RBP16.64■□□□□ 0.25
CPSF7-209ENST00000463244 SLC2A5P22732 501 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 SLC35A2P78381 396 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 GINS1Q14691 196 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 HSP90B2PQ58FF3 399 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 LCN1P1Q5VSP4 162 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 BATF2Q8N1L9 274 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 GIPC3Q8TF64 312 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 MROQ9BYG7 248 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 ARL8BQ9NVJ2 186 aa16.64■□□□□ 0.25
CPSF7-209ENST00000463244 NUFIP1Q9UHK0 495 aaKnown RBP16.64■□□□□ 0.25
CPSF7-209ENST00000463244 PQLC2LA1A4F0 135 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 MEX3AA1L020 520 aaKnown RBP16.63■□□□□ 0.25
CPSF7-209ENST00000463244 ARRDC5A6NEK1 342 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 MPZP25189 248 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 OR12D2P58182 307 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 RPS7P62081 194 aaKnown RBP16.63■□□□□ 0.25
CPSF7-209ENST00000463244 DYNC1I2Q13409 638 aaKnown RBP16.63■□□□□ 0.25
CPSF7-209ENST00000463244 GK3PQ14409 553 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 TCTEX1D4Q5JR98 221 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 TMEM42Q69YG0 159 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 ASCC1Q8N9N2 400 aaKnown RBP16.63■□□□□ 0.25
CPSF7-209ENST00000463244 RCC1LQ96I51 464 aaKnown RBP16.63■□□□□ 0.25
CPSF7-209ENST00000463244 YIPF3Q9GZM5 350 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 FAM107BQ9H098 131 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 HILPDAQ9Y5L2 63 aa16.63■□□□□ 0.25
CPSF7-209ENST00000463244 FAM90A22PA8MWA6 464 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 PRR32B1ATL7 298 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 ZNF737O75373 536 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 PF4P02776 101 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 HMGN1P05114 100 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 VSIG8P0DPA2 414 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 AZGP1P25311 298 aaKnown RBP16.62■□□□□ 0.25
CPSF7-209ENST00000463244 KRTAP10-11P60412 298 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 ERVK11-1P61568 191 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 ROM1Q03395 351 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 COL10A1Q03692 680 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 SLC34A1Q06495 639 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 FAM98BQ52LJ0 330 aaKnown RBP16.62■□□□□ 0.25
CPSF7-209ENST00000463244 CLVS2Q5SYC1 327 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 MINOS1Q5TGZ0 78 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 TCF23Q7RTU1 214 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 ZNF679Q8IYX0 411 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 GPR173Q9NS66 373 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 SLC22A13Q9Y226 551 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 MINOS1-NBL1R4GNA1 71 aa16.62■□□□□ 0.25
CPSF7-209ENST00000463244 WI2-2373I1.2A0A1W2PRP0 233 aa16.61■□□□□ 0.25
CPSF7-209ENST00000463244 DLGAP1O14490 977 aa16.61■□□□□ 0.25
CPSF7-209ENST00000463244 ZNF254O75437 659 aa16.61■□□□□ 0.25
CPSF7-209ENST00000463244 TTRP02766 147 aa16.61■□□□□ 0.25
CPSF7-209ENST00000463244 EDDM3BP56851 147 aa16.61■□□□□ 0.25
CPSF7-209ENST00000463244 MFGE8Q08431 387 aaPredicted RBP16.61■□□□□ 0.25
CPSF7-209ENST00000463244 ZNF829Q3KNS6 432 aaPredicted RBP16.61■□□□□ 0.25
CPSF7-209ENST00000463244 DEFB121Q5J5C9 76 aa16.61■□□□□ 0.25
CPSF7-209ENST00000463244 ASRGL1Q7L266 308 aa16.61■□□□□ 0.25
CPSF7-209ENST00000463244 DHFR2Q86XF0 187 aa16.61■□□□□ 0.25
CPSF7-209ENST00000463244 ZNF714Q96N38 554 aa16.61■□□□□ 0.25
CPSF7-209ENST00000463244 TSSC4Q9Y5U2 329 aaPredicted RBP16.61■□□□□ 0.25
CPSF7-209ENST00000463244 TCRBV4S1A1TA0A5B7 111 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 DUS4LO95620 317 aaKnown RBP16.6■□□□□ 0.25
CPSF7-209ENST00000463244 RIDAP52758 137 aaKnown RBP16.6■□□□□ 0.25
CPSF7-209ENST00000463244 ACTA2P62736 377 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 ACTG2P63267 376 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 ACTC1P68032 377 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 ACTA1P68133 377 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 CDK5Q00535 292 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 APOFQ13790 326 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 CCDC121Q6ZUS5 278 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 GDPD3Q7L5L3 318 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 PKIBQ9C010 78 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 MED4Q9NPJ6 270 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 DNAJB9Q9UBS3 223 aa16.6■□□□□ 0.25
CPSF7-209ENST00000463244 IGHV2-26A0A0B4J1V2 119 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 CHRM2P08172 466 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 MRPL3P09001 348 aaKnown RBP16.59■□□□□ 0.25
CPSF7-209ENST00000463244 RAP2AP10114 183 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 ESRRGP62508 458 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 MEF2CQ06413 473 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-209ENST00000463244 EGFEM1PQ0D2K5 195 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 IL24Q13007 206 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 CENPVQ7Z7K6 275 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-209ENST00000463244 ANGPTL5Q86XS5 388 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 OR8H2Q8N162 312 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 NDNFQ8TB73 568 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 ASB17Q8WXJ9 295 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 MYDGFQ969H8 173 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 INPP5EQ9NRR6 644 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.59■□□□□ 0.255e-8■■■■■ 34.6
CPSF7-209ENST00000463244 COPS3Q9UNS2 423 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 V9GYS6 101 aa16.59■□□□□ 0.25
CPSF7-209ENST00000463244 H3BUI4 141 aa16.58■□□□□ 0.24
CPSF7-209ENST00000463244 SRSF10O75494 262 aaKnown RBP16.58■□□□□ 0.24
CPSF7-209ENST00000463244 OSMP13725 252 aa16.58■□□□□ 0.24
CPSF7-209ENST00000463244 MS4A2Q01362 244 aa16.58■□□□□ 0.24
CPSF7-209ENST00000463244 TRIM25Q14258 630 aaKnown RBP16.58■□□□□ 0.24
CPSF7-209ENST00000463244 C16orf82Q7Z2V1 217 aa16.58■□□□□ 0.24
CPSF7-209ENST00000463244 TMEM179BQ7Z7N9 219 aa16.58■□□□□ 0.24
CPSF7-209ENST00000463244 ZNF676Q8N7Q3 588 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms