RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 PLATP00750 562 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 IL5P05113 134 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 GSTP1P09211 210 aaKnown RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 DUX4L2P0CJ85 424 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 DUX4L3P0CJ86 424 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 DUX4L4P0CJ87 422 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 DUX4L5P0CJ88 424 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 DUX4L6P0CJ89 424 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 DUX4L7P0CJ90 424 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 NFYAP23511 347 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 KIR2DL2P43627 348 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 RBP2P50120 134 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 GK2Q14410 553 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 OVCH2Q7RTZ1 564 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 CD163Q86VB7 1156 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 GVQW1Q8N7I0 195 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 STEAP2Q8NFT2 490 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 OR4S1Q8NGB4 309 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 ARHGAP5-AS1Q96IT6 56 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 REPIN1Q9BWE0 567 aaKnown RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 METTL9Q9H1A3 318 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 POFUT1Q9H488 388 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 DUX4Q9UBX2 424 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 STARD10Q9Y365 291 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 MYO7BQ6PIF6 2116 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 MBD3L4A6NDZ8 208 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-213ENST00000462730 MBD3L3A6NE82 208 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-213ENST00000462730 MBD3L5A6NJ08 208 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-213ENST00000462730 ZNF850A8MQ14 1090 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 C1QTNF9BB2RNN3 333 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 ANGPTL7O43827 346 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 LYZL6O75951 148 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 RGS11O94810 467 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 NGFP01138 241 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 CD74P04233 296 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 SERPINA5P05154 406 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 C1QTNF9P0C862 333 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 HOXB1P14653 301 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-213ENST00000462730 ATP1B3P54709 279 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 TMEM50BP56557 158 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 TGFBR3Q03167 851 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 FOXF2Q12947 444 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 HLXQ14774 488 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-213ENST00000462730 KRTCAP3Q53RY4 240 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 ZNF324BQ6AW86 544 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-213ENST00000462730 SEM1Q6ZVN7 128 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 FAM89BQ8N5H3 189 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 OR6K3Q8NGY3 331 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 MBD3L2Q8NHZ7 208 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-213ENST00000462730 ASB13Q8WXK3 278 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 GPR160Q9UJ42 338 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 GTF3C1Q12789 2109 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 FIGNL2A6NMB9 653 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 PYCARD-AS1I3L0S3 204 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 WDR1O75083 606 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 HTR3BO95264 441 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 AMY2AP04746 511 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 WNT5AP41221 380 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 FUT6P51993 359 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 UBE2NP61088 152 aaKnown RBP12.49□□□□□ -0.41
HDAC6-213ENST00000462730 RSU1Q15404 277 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 PXDC1Q5TGL8 231 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 RTL6Q6ICC9 239 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 SLC30A7Q8NEW0 376 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 CYYR1Q96J86 154 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 TECTBQ96PL2 329 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 TM2D1Q9BX74 207 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 KCNK7Q9Y2U2 307 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 FAM215AQ9Y5M1 114 aa12.49□□□□□ -0.41
HDAC6-213ENST00000462730 A0A1W2PR80 420 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 MCRIP1C9JLW8 97 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 MFNGO00587 321 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 CSN2P05814 226 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 HOXD4P09016 255 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-213ENST00000462730 PRKACAP17612 351 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 CPT2P23786 658 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 BLVRBP30043 206 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-213ENST00000462730 TDGF1P3P51864 188 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 PNLIPRP3Q17RR3 467 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 Q6ZT83 130 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 RPRMLQ8N4K4 120 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 CISD2Q8N5K1 135 aaKnown RBP12.48□□□□□ -0.41
HDAC6-213ENST00000462730 NAXEQ8NCW5 288 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 WDR89Q96FK6 387 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-213ENST00000462730 ZNF75AQ96N20 296 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 PAPOLGQ9BWT3 736 aaKnown RBP12.48□□□□□ -0.41
HDAC6-213ENST00000462730 REG4Q9BYZ8 158 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 OR51B6Q9H340 312 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 SDHAF2Q9NX18 166 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 CRIM1Q9NZV1 1036 aa12.48□□□□□ -0.41
HDAC6-213ENST00000462730 MFSD2BA6NFX1 497 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 FOXI3A8MTJ6 420 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-213ENST00000462730 TNFSF13O75888 250 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 RLN1P04808 185 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 ZNF735P0CB33 412 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 PRDX4Q13162 271 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 MEF2DQ14814 521 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 C1orf185Q5T7R7 199 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 OR52W1Q6IF63 320 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 BPIFB2Q8N4F0 458 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms