RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 PGA5P0DJD9 388 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 SLC2A2P11168 524 aaPredicted RBP9.03□□□□□ -0.96
RTF1-202ENST00000462276 ART1P52961 327 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 ERVK11-1P61568 191 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 CCL8P80075 99 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 QRFPP83859 136 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 SLC22A6Q4U2R8 563 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 FIP1L1Q6UN15 594 aaKnown RBP9.03□□□□□ -0.96
RTF1-202ENST00000462276 WDR86Q86TI4 376 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 LINC00596Q86U02 117 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 C11orf53Q8IXP5 236 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 POC1AQ8NBT0 407 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 OR51D1Q8NGF3 324 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 C15orf40Q8WUR7 153 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 ITLN1Q8WWA0 313 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 IGFBPL1Q8WX77 278 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 DVL3Q92997 716 aaPredicted RBP9.03□□□□□ -0.96
RTF1-202ENST00000462276 MARVELD3Q96A59 401 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 RFT1Q96AA3 541 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 VRK1Q99986 396 aaPredicted RBP9.03□□□□□ -0.96
RTF1-202ENST00000462276 CACNG6Q9BXT2 260 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 ABCG5Q9H222 651 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 ELL3Q9HB65 397 aaPredicted RBP9.03□□□□□ -0.96
RTF1-202ENST00000462276 SMURF1Q9HCE7 757 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 GCM1Q9NP62 436 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 MYOZ1Q9NP98 299 aaPredicted RBP9.03□□□□□ -0.96
RTF1-202ENST00000462276 RNF7Q9UBF6 113 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 OR5V1Q9UGF6 321 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 GLS2Q9UI32 602 aa9.03□□□□□ -0.96
RTF1-202ENST00000462276 DOPEY2Q9Y3R5 2298 aa9.02□□□□□ -0.96
RTF1-202ENST00000462276 SMIM30A4D0T7 59 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 PAHP00439 452 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 F12P00748 615 aaPredicted RBP9.02□□□□□ -0.97
RTF1-202ENST00000462276 LHBP01229 141 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 VSIG8P0DPA2 414 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 PAX1P15863 534 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 TALDO1P37837 337 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 EFNA4P52798 201 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 FGF12P61328 243 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 ARL6IP1Q15041 203 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 P2RY14Q15391 338 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 MPPED2Q15777 294 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 HFEQ30201 348 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 SMIM21Q3B7S5 101 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 DMRTC1Q5HYR2 192 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 WDR82Q6UXN9 313 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 C1QL2Q7Z5L3 287 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 MOGAT3Q86VF5 341 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 LRRC28Q86X40 367 aaPredicted RBP9.02□□□□□ -0.97
RTF1-202ENST00000462276 OSR2Q8N2R0 312 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 OR51T1Q8NGJ9 327 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 OR5D18Q8NGL1 313 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 GTF3AQ92664 365 aaKnown RBP9.02□□□□□ -0.97
RTF1-202ENST00000462276 RDH5Q92781 318 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 PHF21AQ96BD5 680 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 S100A16Q96FQ6 103 aaKnown RBP9.02□□□□□ -0.97
RTF1-202ENST00000462276 C1orf147Q96MC9 270 aaPredicted RBP9.02□□□□□ -0.97
RTF1-202ENST00000462276 NUDT16L1Q9BRJ7 211 aaKnown RBP9.02□□□□□ -0.97
RTF1-202ENST00000462276 TMEM59Q9BXS4 323 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 C6orf62Q9GZU0 229 aaPredicted RBP9.02□□□□□ -0.97
RTF1-202ENST00000462276 BARX1Q9HBU1 254 aaPredicted RBP9.02□□□□□ -0.97
RTF1-202ENST00000462276 C1orf123Q9NWV4 160 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 MTCH1Q9NZJ7 389 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 COMMD3Q9UBI1 195 aa9.02□□□□□ -0.97
RTF1-202ENST00000462276 SPG11Q96JI7 2443 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 IGKV1-12A0A0C4DH73 117 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 IGHV1-69-2A0A0G2JMI3 117 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 TMEM272A0A1B0GTI8 110 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 hCG_1807616A0A1W2PRN6 198 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 SRRM5B3KS81 715 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 RGS5O15539 181 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 SPRY1O43609 319 aaPredicted RBP9.01□□□□□ -0.97
RTF1-202ENST00000462276 SYNGR1O43759 233 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 ANGPTL7O43827 346 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 NXPH2O95156 264 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 PLATP00750 562 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 KNG1P01042 644 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 IGKV1D-12P01611 117 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 GLAP06280 429 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 SNRPBP14678 240 aaKnown RBP9.01□□□□□ -0.97
RTF1-202ENST00000462276 MUC1P15941 1255 aaPredicted RBP9.01□□□□□ -0.97
RTF1-202ENST00000462276 CPT2P23786 658 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 CLDN12P56749 244 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 TMEM33P57088 247 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 IL13RA2Q14627 380 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 KCNJ8Q15842 424 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 MPV17LQ2QL34 196 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 SPIN3Q5JUX0 258 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 UBE2NLQ5JXB2 153 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 PRAMEF6Q5VXH4 476 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 METAP1DQ6UB28 335 aaPredicted RBP9.01□□□□□ -0.97
RTF1-202ENST00000462276 PEG10Q86TG7 708 aaKnown RBP9.01□□□□□ -0.97
RTF1-202ENST00000462276 LURAP1LQ8IV03 231 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 FAM58AQ8N1B3 248 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 FAM89BQ8N5H3 189 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 SAMD12Q8N8I0 201 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 OR56B1Q8NGI3 324 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 LGALS14Q8TCE9 139 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 LRRC29Q8WV35 223 aa9.01□□□□□ -0.97
RTF1-202ENST00000462276 WDFY2Q96P53 400 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms