RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TMEM59Q9BXS4 323 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 PKIBQ9C010 78 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 SELENOIQ9C0D9 397 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 SLC22A4Q9H015 551 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 CST11Q9H112 138 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 CXXC4Q9H2H0 198 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 ZNF442Q9H7R0 627 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 MSL2Q9HCI7 577 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 NGBQ9NPG2 151 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.1□□□□□ -1.59
SDC4P-201ENST00000453285 CA10Q9NS85 328 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 ZNF581Q9P0T4 197 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 NDRG3Q9UGV2 375 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 KCNK7Q9Y2U2 307 aa5.1□□□□□ -1.59
SDC4P-201ENST00000453285 NOP16Q9Y3C1 178 aaKnown RBP5.1□□□□□ -1.59
SDC4P-201ENST00000453285 ZNF462Q96JM2 2506 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SPTAN1Q13813 2472 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 YLPM1P49750 1951 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SMG1Q96Q15 3661 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 A0A1B0GVG6 124 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ZSCAN5BA6NJL1 495 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 TMEM210A6NLX4 147 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 DEFB108AA8MXU0 73 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 E7EQL1 145 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 F5H5P2 479 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 H7C417 338 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 J3QT63 122 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SULT1C2O00338 296 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 MFNGO00587 321 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 AKR7A2O43488 359 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SSX4O60224 188 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SSX5O60225 188 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 NOS1APO75052 506 aaPredicted RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ZNF780AO75290 641 aaPredicted RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SCGNO76038 276 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 PLAUP00749 431 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ACAA1P09110 424 aaPredicted RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 GTF2F2P13984 249 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SPNP16150 400 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 PRSS3P35030 304 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 CD200P41217 278 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 RFX2P48378 723 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SRP9P49458 86 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 KLF3P57682 345 aaPredicted RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 FGF12P61328 243 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ERVK11-1P61568 191 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 RPS23P62266 143 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 MRPS10P82664 201 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SCN1BQ07699 218 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 KLF9Q13886 244 aaPredicted RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 RSU1Q15404 277 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ADIPOQQ15848 244 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 FAM189A2Q15884 450 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 TAF9Q16594 264 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 RGS21Q2M5E4 152 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 CDNFQ49AH0 187 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SPRNQ5BIV9 151 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 RNASE12Q5GAN4 147 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 NHLRC3Q5JS37 347 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 HACD4Q5VWC8 232 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 OLFML2AQ68BL7 652 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ADAM5Q6NVV9 412 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 HAGHLQ6PII5 290 aaPredicted RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SLC22A25Q6T423 547 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 DCDC5Q6ZRR9 648 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 MKXQ8IYA7 352 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 FBXL14Q8N1E6 418 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 OSR2Q8N2R0 312 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 CENPSQ8N2Z9 138 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SPERTQ8NA61 448 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 POC5Q8NA72 575 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 OR10AD1Q8NGE0 317 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 OR56B1Q8NGI3 324 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 OR51T1Q8NGJ9 327 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 OR13G1Q8NGZ3 307 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 OR8S1Q8NH09 359 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SETD6Q8TBK2 473 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 FCAMRQ8WWV6 532 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ST8SIA4Q92187 359 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 NEUROG1Q92886 237 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SLAMF9Q96A28 289 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 PHF21AQ96BD5 680 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 MRPS24Q96EL2 167 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 LRRC46Q96FV0 321 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 POM121Q96HA1 1249 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ZNF488Q96MN9 340 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 S100A13Q99584 98 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 SYT3Q9BQG1 590 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 TMEM204Q9BSN7 226 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 URM1Q9BTM9 101 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 PECRQ9BY49 303 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 C11orf54Q9H0W9 315 aaPredicted RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 TLNRD1Q9H1K6 362 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ESRP2Q9H6T0 727 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ZMAT3Q9HA38 289 aaKnown RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ELL3Q9HB65 397 aaPredicted RBP5.09□□□□□ -1.59
SDC4P-201ENST00000453285 TAAR3PQ9P1P4 343 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 KLK11Q9UBX7 282 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 MTFP1Q9UDX5 166 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms