RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 ZDHHC21Q8IVQ6 265 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 LNX2Q8N448 690 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 RNF152Q8N8N0 203 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 OR4Q3Q8NH05 313 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 OR5P3Q8WZ94 311 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 RPL3LQ92901 407 aaKnown RBP5.73□□□□□ -1.49
RBM39-218ENST00000449489 STMN2Q93045 179 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 ITFG2Q969R8 447 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 SGK3Q96BR1 496 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 CGREF1Q99674 301 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 RGCCQ9H4X1 137 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 ANKRD19PQ9H560 264 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 DCLRE1BQ9H816 532 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 RHBDD3Q9Y3P4 386 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 IER3IP1Q9Y5U9 82 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 HSPG2P98160 4391 aa5.73□□□□□ -1.49
RBM39-218ENST00000449489 RFPL4AA6NLU0 287 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 RFPL4AL1F8VTS6 287 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 SOCS2O14508 198 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 ARPC3O15145 178 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 TUSC2O75896 110 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 APOC1P02654 83 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 OR1E2P47887 323 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 CAPZA1P52907 286 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 RAB25P57735 213 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 MTPNP58546 118 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 GMFBP60983 142 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 DYNC1I2Q13409 638 aaKnown RBP5.72□□□□□ -1.49
RBM39-218ENST00000449489 KLHL12Q53G59 568 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 FGD3Q5JSP0 725 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 TEX38Q6PEX7 206 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 C17orf53Q8N3J3 647 aaPredicted RBP5.72□□□□□ -1.49
RBM39-218ENST00000449489 DRAM1Q8N682 238 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 ZBTB34Q8NCN2 500 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 OR14K1Q8NGZ2 314 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 OR10A6Q8NH74 314 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 ZNF671Q8TAW3 534 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 GATAD1Q8WUU5 269 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 LZICQ8WZA0 190 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 LINC00476Q8WZB0 136 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 REEP6Q96HR9 211 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 FNDC11Q9BVV2 318 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 PAPOLGQ9BWT3 736 aaKnown RBP5.72□□□□□ -1.49
RBM39-218ENST00000449489 C1orf21Q9H246 121 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 YY1AP1Q9H869 796 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 TBC1D23Q9NUY8 699 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 MRPL22Q9NWU5 206 aaKnown RBP5.72□□□□□ -1.49
RBM39-218ENST00000449489 ING3Q9NXR8 418 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 DPM3Q9P2X0 92 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 CD300AQ9UGN4 299 aa5.72□□□□□ -1.49
RBM39-218ENST00000449489 IGHV2-26A0A0B4J1V2 119 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 OR6C68A6NDL8 312 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 FFAR1O14842 300 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 SLC25A17O43808 307 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 NOS1APO75052 506 aaPredicted RBP5.71□□□□□ -1.5
RBM39-218ENST00000449489 RENP00797 406 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 TK1P04183 234 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 IFNA6P05013 189 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 TROVE2P10155 538 aaKnown RBP eCLIP5.71□□□□□ -1.5
RBM39-218ENST00000449489 PRDX2P32119 198 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 RPS19P39019 145 aaKnown RBP5.71□□□□□ -1.5
RBM39-218ENST00000449489 GPR4P46093 362 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 PRKXP51817 358 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 FXYD6P3P58550 94 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 ACTA2P62736 377 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 ACTG2P63267 376 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 SELENOWP63302 87 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 ACTC1P68032 377 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 ACTA1P68133 377 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 BDH1Q02338 343 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 MEF2CQ06413 473 aaPredicted RBP5.71□□□□□ -1.5
RBM39-218ENST00000449489 TIGD6Q17RP2 521 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 SMIM21Q3B7S5 101 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 SMARCD3Q6STE5 483 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 ZNF730Q6ZMV8 503 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 ACP7Q6ZNF0 438 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 LCNL1Q6ZST4 164 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 RRM2BQ7LG56 351 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 PRSS45Q7RTY3 260 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 CD177Q8N6Q3 437 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 OR4M1Q8NGD0 313 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 OR4P4Q8NGL7 312 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 NDNFQ8TB73 568 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 CREB3L1Q96BA8 519 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 RNFT2Q96EX2 444 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 RNF170Q96K19 258 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 DUX3Q96PT4 197 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 CDRT15Q96T59 188 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 NRIP2Q9BQI9 281 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 COPS4Q9BT78 406 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 OR51I2Q9H344 312 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 RABEP2Q9H5N1 569 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 PPP1R3EQ9H7J1 279 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 PAPOLBQ9NRJ5 636 aaKnown RBP5.71□□□□□ -1.5
RBM39-218ENST00000449489 CHCHD3Q9NX63 227 aaKnown RBP5.71□□□□□ -1.5
RBM39-218ENST00000449489 MOB4Q9Y3A3 225 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 SESN1Q9Y6P5 492 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 HSPE1-MOB4S4R3N1 261 aa5.71□□□□□ -1.5
RBM39-218ENST00000449489 FAM90A18PA6NE21 464 aa5.7□□□□□ -1.5
RBM39-218ENST00000449489 FAM90A16PA6NEW6 464 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms