RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TNFAIP6P98066 277 aaPredicted RBP16.3■□□□□ 0.2
RPS28-202ENST00000449223 MPPED2Q15777 294 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 SPANXN2Q5MJ10 180 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 SP5Q6BEB4 398 aaPredicted RBP16.3■□□□□ 0.2
RPS28-202ENST00000449223 CNIH2Q6PI25 160 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 WDR82Q6UXN9 313 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 BIVMQ86UB2 503 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 FAM89BQ8N5H3 189 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 Q8TCH9 128 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 NRIP2Q9BQI9 281 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 LPAR5Q9H1C0 372 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 HMG20AQ9NP66 347 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 DYNLRB1Q9NP97 96 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 RABL2AQ9UBK7 228 aaPredicted RBP16.3■□□□□ 0.2
RPS28-202ENST00000449223 RABL2BQ9UNT1 228 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 V9GYH0 126 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 A0A1W2PP11 408 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 CLDN25C9JDP6 229 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 AKR7A2O43488 359 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 CRTAPO75718 401 aaPredicted RBP16.29■□□□□ 0.2
RPS28-202ENST00000449223 RHBDL1O75783 438 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 CD8AP01732 235 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 GRPP07492 148 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 GTF2F2P13984 249 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 TNFRSF1AP19438 455 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 MNDAP41218 407 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 ZNF45Q02386 682 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 PRAMEF6Q5VXH4 476 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 POC1AQ8NBT0 407 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 OR51T1Q8NGJ9 327 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 OR10Z1Q8NGY1 313 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 ITLN1Q8WWA0 313 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 S100A16Q96FQ6 103 aaKnown RBP16.29■□□□□ 0.2
RPS28-202ENST00000449223 Q96M66 194 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 TRAF4Q9BUZ4 470 aaPredicted RBP16.29■□□□□ 0.2
RPS28-202ENST00000449223 TANC2Q9HCD6 1990 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 METTL21EPA6NDL7 271 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 FAM25AB3EWG3 89 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 FAM25CB3EWG5 89 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 FAM25GB3EWG6 89 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 TRAPPC2LH3BP13 241 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 CSTBP04080 98 aaKnown RBP16.29■□□□□ 0.2
RPS28-202ENST00000449223 SERPINA2P20848 420 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 TALDO1P37837 337 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 NR4A2P43354 598 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 NPBWR2P48146 333 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 FGF12P61328 243 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 RAB12Q6IQ22 244 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 BAIAP2L2Q6UXY1 529 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 OR10K1Q8NGX5 313 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 FAM46BQ96A09 425 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 SLAMF9Q96A28 289 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 URM1Q9BTM9 101 aaKnown RBP16.29■□□□□ 0.2
RPS28-202ENST00000449223 WDR12Q9GZL7 423 aaKnown RBP16.29■□□□□ 0.2
RPS28-202ENST00000449223 FN3KRPQ9HA64 309 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 ELL3Q9HB65 397 aaPredicted RBP16.29■□□□□ 0.2
RPS28-202ENST00000449223 HES4Q9HCC6 221 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 GCM1Q9NP62 436 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 EXTL2Q9UBQ6 330 aa16.29■□□□□ 0.2
RPS28-202ENST00000449223 RAB27BO00194 218 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 XRCC3O43542 346 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 MPIG6BO95866 241 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 SOD3P08294 240 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 COX6B1P14854 86 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 BCL3P20749 454 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 SPRNQ5BIV9 151 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 OSR2Q8N2R0 312 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 OR4M1Q8NGD0 313 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 EGLN1Q9GZT9 426 aa16.28■□□□□ 0.2
RPS28-202ENST00000449223 A1L4Q6 167 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A10PA6NDY2 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A18PA6NE21 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A16PA6NEW6 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FABP12A6NFH5 140 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A20PA6NIJ5 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A8PA6NJQ4 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A7PA6NKC0 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FOXI3A8MTJ6 420 aaPredicted RBP16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A22PA8MWA6 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A12PA8MX19 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A5PA8MXJ8 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A23PA8MXZ1 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 F8VVB4 439 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 F8VWA3 439 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 HTR3BO95264 441 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 CHRM2P08172 466 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A15PP0C7V4 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A13PP0C7W8 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A14PP0C7W9 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 FAM90A24PP0C7X0 464 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 CPT2P23786 658 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 ZNF181Q2M3W8 571 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 BANF2Q9H503 90 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 PLEKHF2Q9H8W4 249 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 SAP30LQ9HAJ7 183 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 DIABLOQ9NR28 239 aa16.27■□□□□ 0.2
RPS28-202ENST00000449223 RBFOX1Q9NWB1 397 aaKnown RBP16.27■□□□□ 0.2
RPS28-202ENST00000449223 A6NLC8 198 aa16.26■□□□□ 0.19
RPS28-202ENST00000449223 SRRM5B3KS81 715 aa16.26■□□□□ 0.19
RPS28-202ENST00000449223 LHBP01229 141 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms