RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 C17orf105B2RV13 164 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 ST8SIA3O43173 380 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 KLF8O95600 359 aaPredicted RBP14.07□□□□□ -0.16
CNOT3-204ENST00000447684 GABRR1P24046 479 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 ALDH3B1P43353 468 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 HLA-DRB3P79483 266 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 MEX3BQ6ZN04 569 aaKnown RBP14.07□□□□□ -0.16
CNOT3-204ENST00000447684 C6orf201Q7Z4U5 140 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 C1QL2Q7Z5L3 287 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 OR5AS1Q8N127 324 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 MRPL43Q8N983 215 aaKnown RBP14.07□□□□□ -0.16
CNOT3-204ENST00000447684 METTL9Q9H1A3 318 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 GAB2Q9UQC2 676 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 TMED7-TICAM2A0A0A6YYA0 188 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 PLPP3O14495 311 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 ONECUT2O95948 504 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 PGA3P0DJD8 388 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 EWSR1Q01844 656 aaKnown RBP eCLIP14.07□□□□□ -0.16
CNOT3-204ENST00000447684 GNMTQ14749 295 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 FAM180AQ6UWF9 173 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 RTL10Q7L3V2 364 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 NUP54Q7Z3B4 507 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 WDFY1Q8IWB7 410 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 TMEM217Q8N7C4 229 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 STT3BQ8TCJ2 826 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 CABLES2Q9BTV7 478 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 SNHG12Q9BXW3 62 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 GPR84Q9NQS5 396 aa14.07□□□□□ -0.16
CNOT3-204ENST00000447684 ZNF850A8MQ14 1090 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 LMO1P25800 156 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 RUNX1Q01196 453 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 DNM1P34Q6PK57 102 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 OR6X1Q8NH79 312 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 OR14L1PQ8NHC6 308 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 SNIP1Q8TAD8 396 aaKnown RBP14.06□□□□□ -0.16
CNOT3-204ENST00000447684 RNF133Q8WVZ7 376 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 C11orf40Q8WZ69 217 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 C5orf34Q96MH7 638 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 SMDT1Q9H4I9 107 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 KIAA1456Q9P272 454 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 SPEGQ15772 3267 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 A0A1B0GW64 132 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 ADH1BP00325 375 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 THEGLP0DJG4 465 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 MMP9P14780 707 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 OPRM1P35372 400 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 POU3F1Q03052 451 aaPredicted RBP14.06□□□□□ -0.16
CNOT3-204ENST00000447684 CLEC12BQ2HXU8 276 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 C2orf27AQ580R0 203 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 C1orf189Q5VU69 101 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 SPRED2Q7Z698 418 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 OOSP2Q86WS3 158 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 RTN4IP1Q8WWV3 396 aaPredicted RBP14.06□□□□□ -0.16
CNOT3-204ENST00000447684 SHDQ96IW2 340 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 NUDT22Q9BRQ3 303 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 PECRQ9BY49 303 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 TBL1XR1Q9BZK7 514 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 GNG13Q9P2W3 67 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 FBLN5Q9UBX5 448 aa14.06□□□□□ -0.16
CNOT3-204ENST00000447684 DVL1O14640 695 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 CTSDP07339 412 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-204ENST00000447684 IL12BP29460 328 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 NOVA1P51513 510 aaKnown RBP14.05□□□□□ -0.16
CNOT3-204ENST00000447684 RRADP55042 308 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 LRP11Q86VZ4 500 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 TMEM183AQ8IXX5 376 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 NECAP1Q8NC96 275 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 MMABQ96EY8 250 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-204ENST00000447684 IL17BQ9UHF5 180 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 MCTS1Q9ULC4 181 aaKnown RBP14.05□□□□□ -0.16
CNOT3-204ENST00000447684 A0A0J9YY10 115 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 DFFBO76075 338 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 MT-ATP6P00846 226 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 DBHP09172 617 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 HNRNPA1P09651 372 aaKnown RBP eCLIP14.05□□□□□ -0.16
CNOT3-204ENST00000447684 FOLR1P15328 257 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 FUT7Q11130 342 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 COL13A1Q5TAT6 717 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-204ENST00000447684 MAGT1Q9H0U3 335 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 PPP1R14DQ9NXH3 145 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 CBY1Q9Y3M2 126 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 PCNX3Q9H6A9 2034 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 ZFP92A6NM28 416 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 CLDN34H7C241 214 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 CST7O76096 145 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 DXOO77932 396 aaKnown RBP14.05□□□□□ -0.16
CNOT3-204ENST00000447684 NXPH3O95157 252 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 IL33O95760 270 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 PAX1P15863 534 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 PNLIPP16233 465 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 ANOS1P23352 680 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 DUSP1P28562 367 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 SFTPDP35247 375 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 PRTGQ2VWP7 1150 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 WDR25Q64LD2 544 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-204ENST00000447684 SLC35E3Q7Z769 313 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 PLEKHJ1Q9NW61 149 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 MMACHCQ9Y4U1 282 aa14.05□□□□□ -0.16
CNOT3-204ENST00000447684 ASCC3Q8N3C0 2202 aaKnown RBP14.04□□□□□ -0.16
CNOT3-204ENST00000447684 XKRY2A2RUG3 117 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms