RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	CPEB3	Q8NE35	698 aa	Known RBP	11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	ZNF837	Q96EG3	531 aa	Predicted RBP	11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	ASCL3	Q9NQ33	180 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	FGF21	Q9NSA1	209 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	PLEKHJ1	Q9NW61	149 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	ZDHHC8	Q9ULC8	765 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	DOCK11	Q5JSL3	2073 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	POLE	Q07864	2286 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	ZNF726	A6NNF4	738 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	DXO	O77932	396 aa	Known RBP	11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	TIAF1	O95411	115 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	TSPAN15	O95858	294 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	NPS	P0C0P6	89 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	CCNO	P22674	350 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	TMEM33	P57088	247 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	ISX	Q2M1V0	245 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	TMEM128	Q5BJH2	165 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	ASB10	Q8WXI3	467 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	FAM206A	Q9NX38	181 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	LHFPL6	Q9Y693	200 aa		11.03	□□□□□ -0.64
DDR1-238	ENST00000446312	ALG1L2	C9J202	215 aa		11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	OR2J2	O76002	312 aa		11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	ONECUT2	O95948	504 aa		11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	HIST1H1D	P16402	221 aa	Known RBP	11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	RPL12	P30050	165 aa	Known RBP	11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	PTGER4	P35408	488 aa		11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	GLP1R	P43220	463 aa		11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	CLEC12B	Q2HXU8	276 aa		11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	KIAA0895L	Q68EN5	471 aa		11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	LPAR3	Q9UBY5	353 aa		11.02	□□□□□ -0.64
DDR1-238	ENST00000446312	BOD1L1	Q8NFC6	3051 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	EML6	Q6ZMW3	1958 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	IGKV1-9	A0A0C4DH69	117 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	IGKV3-11	P04433	115 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	FAM157C	P0CG43	387 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	ROM1	Q03395	351 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	CFHR1	Q03591	330 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	RNF151	Q2KHN1	245 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	FAM213B	Q8TBF2	198 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	STT3B	Q8TCJ2	826 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	ZNF700	Q9H0M5	742 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	RGCC	Q9H4X1	137 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	SLC2A8	Q9NY64	477 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	CLEC1B	Q9P126	229 aa		11.02	□□□□□ -0.65
DDR1-238	ENST00000446312	VSTM2B	A6NLU5	285 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	EREG	O14944	169 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	SLC25A4	P12235	298 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	RAB5A	P20339	215 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	SLC6A8	P48029	635 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	CAMLG	P49069	296 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	YPEL5	P62699	121 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	IGFBP7	Q16270	282 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	AWAT1	Q58HT5	328 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	LYZL2	Q7Z4W2	148 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	OR5AS1	Q8N127	324 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	KIRREL1	Q96J84	757 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	RARRES2	Q99969	163 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	MTIF3	Q9H2K0	278 aa	Known RBP	11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	MCTS1	Q9ULC4	181 aa	Known RBP	11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	TSPAN2	O60636	221 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	HPN	P05981	417 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	AGA	P20933	346 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	DUSP1	P28562	367 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	LSM6	P62312	80 aa	Known RBP	11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	C4orf17	Q53FE4	359 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	HOGA1	Q86XE5	327 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	UEVLD	Q8IX04	471 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	TSTD1	Q8NFU3	115 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	HOXB13	Q92826	284 aa	Predicted RBP	11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	GNRHR2	Q96P88	292 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	UCN2	Q96RP3	112 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	SEC11C	Q9BY50	192 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	OR10A2	Q9H208	303 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	ZNF160	Q9HCG1	818 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312		H3BP45	60 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	SFT2D2	O95562	160 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	IGHV2-5	P01817	119 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	HEXA	P06865	529 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	FOLR2	P14207	255 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	CAV2	P51636	162 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	HAGH	Q16775	308 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	AKR1C8P	Q5T2L2	129 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	CHST11	Q9NPF2	352 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	RCC2	Q9P258	522 aa	Known RBP	11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	PIGL	Q9Y2B2	252 aa		11.01	□□□□□ -0.65
DDR1-238	ENST00000446312	FABP4	P15090	132 aa		11	□□□□□ -0.65
DDR1-238	ENST00000446312	ZNF43	P17038	809 aa		11	□□□□□ -0.65
DDR1-238	ENST00000446312	SPEM2	Q0P670	501 aa		11	□□□□□ -0.65
DDR1-238	ENST00000446312	TRA2A	Q13595	282 aa	Known RBP eCLIP	11	□□□□□ -0.65
DDR1-238	ENST00000446312	KISS1	Q15726	138 aa		11	□□□□□ -0.65
DDR1-238	ENST00000446312	COL13A1	Q5TAT6	717 aa	Predicted RBP	11	□□□□□ -0.65
DDR1-238	ENST00000446312	OR6X1	Q8NH79	312 aa		11	□□□□□ -0.65
DDR1-238	ENST00000446312	GPR132	Q9UNW8	380 aa		11	□□□□□ -0.65
DDR1-238	ENST00000446312	C14orf166	Q9Y224	244 aa	Known RBP	11	□□□□□ -0.65
DDR1-238	ENST00000446312	C5orf67	F2Z3F1	127 aa		11	□□□□□ -0.65
DDR1-238	ENST00000446312	PPIH	O43447	177 aa	Known RBP	11	□□□□□ -0.65
DDR1-238	ENST00000446312	PPP1CC	P36873	323 aa	Known RBP	11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms