RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ZCCHC4Q9H5U6 513 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 ONECUT1Q9UBC0 465 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 GLS2Q9UI32 602 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 CAB39Q9Y376 341 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-216ENST00000439475 EXOSC1Q9Y3B2 195 aaKnown RBP8.66□□□□□ -1.02
MCF2L-216ENST00000439475 MAB21L2Q9Y586 359 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 IGHV3OR16-10A0A075B7F0 116 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 TRBV23-1A0A0A0MS06 115 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 hCG_1809904A0A1W2PP81 198 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 A0A1W2PPE2 198 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 A0A1W2PR64 198 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 A0A1W2PRV1 198 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 OR4C45A6NMZ5 311 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 MAGEB3O15480 346 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 WBP4O75554 376 aaKnown RBP8.65□□□□□ -1.02
MCF2L-216ENST00000439475 CLIC3O95833 236 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 KNG1P01042 644 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 CD2P06729 351 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 CHRM2P08172 466 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 PRTN3P24158 256 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 AZGP1P25311 298 aaKnown RBP8.65□□□□□ -1.02
MCF2L-216ENST00000439475 ACTG1P63261 375 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 ADARB1P78563 741 aaKnown RBP8.65□□□□□ -1.02
MCF2L-216ENST00000439475 GUCA2AQ02747 115 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 SLC34A1Q06495 639 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 DGUOKQ16854 277 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 CCDC58Q4VC31 144 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 RPL22L1Q6P5R6 122 aaKnown RBP8.65□□□□□ -1.02
MCF2L-216ENST00000439475 C12orf54Q6X4T0 127 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 C1orf122Q6ZSJ8 110 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 CALHM1Q8IU99 346 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 BCL6BQ8N143 479 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-216ENST00000439475 SIGLECL1Q8N7X8 197 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 ZNRF1Q8ND25 227 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 C8orf46Q8TAG6 207 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 PPP1R35Q8TAP8 253 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 CNIH3Q8TBE1 160 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 GCDHQ92947 438 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-216ENST00000439475 CPNE2Q96FN4 548 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-216ENST00000439475 TMEM80Q96HE8 168 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 CEP19Q96LK0 163 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 ZNF488Q96MN9 340 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 OPALINQ96PE5 141 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 NRIP2Q9BQI9 281 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 JAM3Q9BX67 310 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 FAM234AQ9H0X4 552 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 ISG20L2Q9H9L3 353 aaKnown RBP8.65□□□□□ -1.02
MCF2L-216ENST00000439475 NOX4Q9NPH5 578 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 OR14J1Q9UGF5 321 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 DHDHQ9UQ10 334 aa8.65□□□□□ -1.02
MCF2L-216ENST00000439475 IGKV1D-17A0A075B6S4 117 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 CENPVL3A0A0U1RRI6 287 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 A0A1B0GW55 424 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 EFCAB10A6NFE3 127 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 M0R1W7 72 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 ALX3O95076 343 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 SFTPBP07988 381 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 DUX4L2P0CJ85 424 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 DUX4L3P0CJ86 424 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 DUX4L4P0CJ87 422 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 DUX4L5P0CJ88 424 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 DUX4L6P0CJ89 424 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 DUX4L7P0CJ90 424 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 MMP9P14780 707 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 EEF1B2P24534 225 aaKnown RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 POU3F4P49335 361 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 ELF3P78545 371 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 SMN1Q16637 294 aaKnown RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 DUX4L9Q6RFH8 374 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 SLC25A26Q70HW3 274 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 KIR3DL3Q8N743 410 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 ZDHHC22Q8N966 263 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 ZSCAN4Q8NAM6 433 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 OR5D13Q8NGL4 314 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 TSEN15Q8WW01 171 aaKnown RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 LHX4Q969G2 390 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 RNF166Q96A37 237 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 SLC25A28Q96A46 364 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 ADAT3Q96EY9 351 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 TBX15Q96SF7 602 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 ZNF649Q9BS31 505 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 SIRPDQ9H106 197 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 HES4Q9HCC6 221 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 BABAM2Q9NXR7 383 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 DUX4Q9UBX2 424 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 ZNF222Q9UK12 451 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 DIMT1Q9UNQ2 313 aaKnown RBP8.64□□□□□ -1.03
MCF2L-216ENST00000439475 PCDHGB5Q9Y5G0 923 aa8.64□□□□□ -1.03
MCF2L-216ENST00000439475 IGHV1-69DA0A0B4J2H0 117 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 H0YHG0 523 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 INMTO95050 263 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 ZFPL1O95159 310 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 IGHV1-69P01742 117 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 MT-ND2P03891 347 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 HCKP08631 526 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 LIMS3P0CW19 117 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 LIMS4P0CW20 117 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 SELLP14151 372 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 ERVK11-1P61568 191 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms