RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PCP4P48539 62 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 DEFA5Q01523 94 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 MAJINQ3KP22 176 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 AAED1Q7RTV5 226 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 GGNQ86UU5 652 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 OR5M8Q8NGP6 311 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 PLEKHJ1Q9NW61 149 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 EHFQ9NZC4 300 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 A0A087WZY1 265 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 TUBAL3A6NHL2 446 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 FAM74A7A6NL05 159 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 DHRS7CA6NNS2 312 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 A8MXK9 166 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 TERTO14746 1132 aaKnown RBP8.24□□□□□ -1.09
CUX1-206ENST00000437600 FLI1Q01543 452 aaPredicted RBP8.24□□□□□ -1.09
CUX1-206ENST00000437600 PIGYQ3MUY2 71 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 SP6Q3SY56 376 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 FAM74A3Q4VXF1 159 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 STX12Q86Y82 276 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 GPHA2Q96T91 129 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 ALX4Q9H161 411 aaPredicted RBP8.24□□□□□ -1.09
CUX1-206ENST00000437600 SLCO5A1Q9H2Y9 848 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 FLVCR1Q9Y5Y0 555 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 KIAA2026Q5HYC2 2103 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 ZNF587BE7ETH6 402 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 SLC34A2O95436 690 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 MELTFP08582 738 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 PSG4Q00888 419 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 TSPO2Q5TGU0 170 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 C11orf87Q6NUJ2 197 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 H3F3CQ6NXT2 135 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 CLEC18BQ6UXF7 455 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 PGAP1Q75T13 922 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 OR2M7Q8NG81 312 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 ADAMTS17Q8TE56 1095 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 PIGCQ92535 297 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 TMEM230Q96A57 120 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 PHB2Q99623 299 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 GPR87Q9BY21 358 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 OR2S2Q9NQN1 319 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 ROS1P08922 2347 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 A0A1B0GWJ7 208 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 RNF222A6NCQ9 220 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 HMSDA8MTL9 139 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 F5H0A9 414 aaPredicted RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 DNASE2O00115 360 aaPredicted RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 HSPB6O14558 160 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 EIF1BO60739 113 aaKnown RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 CLN5O75503 358 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 DHRS3O75911 302 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 HPNP05981 417 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 SFTPBP07988 381 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 C4BPBP20851 252 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 MPGP29372 298 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 HTR5AP47898 357 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 GRB2P62993 217 aaKnown RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 PMP22Q01453 160 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 PLGLB1Q02325 96 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 MEF2DQ14814 521 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 ANKRD55Q3KP44 614 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 SKA3Q8IX90 412 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 BVESQ8NE79 360 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 OR13G1Q8NGZ3 307 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 PTX4Q96A99 478 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 RRNAD1Q96FB5 475 aaKnown RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 REEP6Q96HR9 211 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 OR10C1Q96KK4 312 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 METTL8Q9H825 291 aaKnown RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 CALHM2Q9HA72 323 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 FOXD3Q9UJU5 478 aaPredicted RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 A0A0B4J2A0 478 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 C21orf140B9A014 251 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 H0YIZ8 118 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 WISP2O76076 250 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 RAC3P60763 192 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 DHODHQ02127 395 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 ZNF92Q03936 586 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 ECH1Q13011 328 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 DRAM2Q6UX65 266 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 TMEM17Q86X19 198 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 OR5H2Q8NGV7 314 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 OR51F2Q8NH61 342 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 OR1S1Q8NH92 325 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 TMEM54Q969K7 222 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 TOMM40LQ969M1 308 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 NARS2Q96I59 477 aaKnown RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 RTBDNQ9BSG5 229 aaPredicted RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 NAA11Q9BSU3 229 aaPredicted RBP8.23□□□□□ -1.09
CUX1-206ENST00000437600 LIME1Q9H400 295 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 SHPKQ9UHJ6 478 aa8.23□□□□□ -1.09
CUX1-206ENST00000437600 MSGN1A6NI15 193 aa8.22□□□□□ -1.09
CUX1-206ENST00000437600 MSTNO14793 375 aa8.22□□□□□ -1.09
CUX1-206ENST00000437600 GEMIN2O14893 280 aaKnown RBP8.22□□□□□ -1.09
CUX1-206ENST00000437600 HLA-HP01893 362 aa8.22□□□□□ -1.09
CUX1-206ENST00000437600 SERPINA5P05154 406 aa8.22□□□□□ -1.09
CUX1-206ENST00000437600 CHRM2P08172 466 aa8.22□□□□□ -1.09
CUX1-206ENST00000437600 RAC2P15153 192 aa8.22□□□□□ -1.09
CUX1-206ENST00000437600 DUSP1P28562 367 aa8.22□□□□□ -1.09
CUX1-206ENST00000437600 ZNF84P51523 738 aa8.22□□□□□ -1.09
CUX1-206ENST00000437600 CCL11P51671 97 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms