RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SLC38A10Q9HBR0 1119 aa3.75□□□□□ -1.81
USP54-206ENST00000433394 GGA2Q9UJY4 613 aa3.75□□□□□ -1.81
USP54-206ENST00000433394 UBIAD1Q9Y5Z9 338 aa3.75□□□□□ -1.81
USP54-206ENST00000433394 NHSQ6T4R5 1651 aa3.75□□□□□ -1.81
USP54-206ENST00000433394 RGPD3A6NKT7 1758 aaPredicted RBP3.74□□□□□ -1.81
USP54-206ENST00000433394 RGPD4Q7Z3J3 1758 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 IGKV1-8A0A0C4DH67 115 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 PSMD11O00231 422 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 MT-ND4P03905 459 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 IVLP07476 585 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 AZU1P20160 251 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 OPRK1P41145 380 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 CTAG1AP78358 180 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 FBXO48Q5FWF7 155 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 TMEM205Q6UW68 189 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 NTM-AS1Q6ZSK4 140 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 Q6ZVH6 145 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 WDR86Q86TI4 376 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 ENKURQ8TC29 256 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 DOT1LQ8TEK3 1739 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 TMEM234Q8WY98 164 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 TMEM159Q96B96 161 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 Q96MT0 163 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 DOK1Q99704 481 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 RBBP8Q99708 897 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 WDR55Q9H6Y2 383 aaPredicted RBP3.74□□□□□ -1.81
USP54-206ENST00000433394 PARVGQ9HBI0 331 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 V9GYY9 64 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 KCPQ6ZWJ8 1503 aa3.74□□□□□ -1.81
USP54-206ENST00000433394 TOGARAM1Q9Y4F4 1720 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 GLI3P10071 1580 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 SBF2Q86WG5 1849 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 TRAV8-4A0A0B4J246 113 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 A0A0B4J2E0 115 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 CENPVL3A0A0U1RRI6 287 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 RAB19A4D1S5 217 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 RSPH10B2B2RC85 870 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 PRMT5O14744 637 aaPredicted RBP3.73□□□□□ -1.81
USP54-206ENST00000433394 GLSO94925 669 aaPredicted RBP3.73□□□□□ -1.81
USP54-206ENST00000433394 P01737 135 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 RSPH10BP0C881 870 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 ME2P23368 584 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 CXCL12P48061 93 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 GTF2A1P52655 376 aaPredicted RBP3.73□□□□□ -1.81
USP54-206ENST00000433394 MTPNP58546 118 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 C5orf47Q569G3 176 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 ZNF684Q5T5D7 378 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 ZNF691Q5VV52 312 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 SAXO2Q658L1 398 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 ZFP1Q6P2D0 407 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 ITPRIPQ8IWB1 547 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 ST13P4Q8IZP2 240 aaPredicted RBP3.73□□□□□ -1.81
USP54-206ENST00000433394 DAW1Q8N136 415 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 TTLQ8NG68 377 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 OR6N1Q8NGY5 312 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 OR52P1PQ8NH57 321 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 LINC01560Q8TB33 94 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 CDKL2Q92772 493 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 RBMXL1Q96E39 390 aaKnown RBP3.73□□□□□ -1.81
USP54-206ENST00000433394 ZNF414Q96IQ9 312 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 NAPGQ99747 312 aaPredicted RBP3.73□□□□□ -1.81
USP54-206ENST00000433394 GGTLC1Q9BX51 225 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 SPZ1Q9BXG8 430 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 ANKHQ9HCJ1 492 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 FBXO8Q9NRD0 319 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 CYTL1Q9NRR1 136 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 RAB23Q9ULC3 237 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 NDRG2Q9UN36 371 aaKnown RBP3.73□□□□□ -1.81
USP54-206ENST00000433394 C5P01031 1676 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 RREB1Q92766 1687 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 LRP4O75096 1905 aa3.73□□□□□ -1.81
USP54-206ENST00000433394 NACAE9PAV3 2078 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 C7orf66A4D0T2 115 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 OR5H1A6NKK0 313 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 CENPBD1B2RD01 187 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 RFXANKO14593 260 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 SOCS1O15524 211 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 RNF113AO15541 343 aaKnown RBP3.72□□□□□ -1.81
USP54-206ENST00000433394 PLIN3O60664 434 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 ZNF324O75467 553 aaPredicted RBP3.72□□□□□ -1.81
USP54-206ENST00000433394 TRAPPC6AO75865 159 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 SCO1O75880 301 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 IL4P05112 153 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 ZNF806P0C7X5 589 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 THRAP10827 490 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 HTR2CP28335 458 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 PSMB2P49721 201 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 HCCSP53701 268 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 MAP3K7CLP57077 242 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 LINC00483Q53H64 154 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 PID1Q7Z2X4 250 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 SLC7A5P1Q8MH63 180 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 ZFAND1Q8TCF1 268 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 RXFP2Q8WXD0 754 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 C19orf60Q96EN9 201 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 SNF8Q96H20 258 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 LINC00477Q96M19 166 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 EMC3Q9P0I2 261 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 PRELID1Q9Y255 219 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 ZNF257Q9Y2Q1 563 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms