RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 RAB11AP62491 216 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 OR8B12Q8NGG6 310 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 OR10S1Q8NGN2 331 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 PTPMT1Q8WUK0 201 aaPredicted RBP10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 PIGTQ969N2 578 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 MVB12AQ96EY5 273 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 RBM14Q96PK6 669 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 RNF208Q9H0X6 261 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 MCTS1Q9ULC4 181 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 TMED3Q9Y3Q3 217 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 ELOA3CA0A087WX78 387 aaPredicted RBP10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 FTCDNL1E5RQL4 147 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 ADAM10O14672 748 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 RER1O15258 196 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 CST7O76096 145 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 RUNX1Q01196 453 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 KISS1Q15726 138 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 C20orf196Q8IYI0 205 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 PLPP5Q8NEB5 264 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 SHDQ96IW2 340 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 SOHLH2Q9NX45 425 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 CCDC187A0A096LP49 1063 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 CRYM-AS1A6NIL9 109 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 MS4A18H0YCH9 400 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 K7N7A8 449 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 PHF1O43189 567 aaPredicted RBP10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 CLPSP04118 112 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 FCGR2AP12318 317 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 FZD2Q14332 565 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 MS4A18Q3C1V0 323 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 DEGS2Q6QHC5 323 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 DBX2Q6ZNG2 339 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 SLC25A31Q9H0C2 315 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 DCAF16Q9NXF7 216 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 A6NCN8 305 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 KLF8O95600 359 aaPredicted RBP10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 MMP7P09237 267 aaPredicted RBP10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 ZNF728P0DKX0 622 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 HSF1Q00613 529 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 EWSR1Q01844 656 aaKnown RBP eCLIP10.13□□□□□ -0.791e-19■■■□□ 14.9
HMGCS1-202ENST00000433297 HHEXQ03014 270 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 C16orf47Q6ZP98 133 aaPredicted RBP10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 ZNF664Q8N3J9 261 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 OR11L1Q8NGX0 322 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 THAP3Q8WTV1 239 aaPredicted RBP10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 FAAP24Q9BTP7 215 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 ARV1Q9H2C2 271 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 ZFP92A6NM28 416 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 B4DGG1 531 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 BCAT2O15382 392 aaPredicted RBP10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 HNRNPA1P09651 372 aaKnown RBP eCLIP10.13□□□□□ -0.793e-6■□□□□ 8
HMGCS1-202ENST00000433297 IFI6P09912 130 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 MMP9P14780 707 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 FUT3P21217 361 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 GLIPR1P48060 266 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 TLE1Q04724 770 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 GPR157Q5UAW9 335 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 SLC22A25Q6T423 547 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 LRRC18Q8N456 261 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 NECAP1Q8NC96 275 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 ADAMTS18Q8TE60 1221 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 RHBDD1Q8TEB9 315 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 HPSE2Q8WWQ2 592 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 ASB10Q8WXI3 467 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 DYRK2Q92630 601 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 GNG13Q9P2W3 67 aa10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 FOXD3Q9UJU5 478 aaPredicted RBP10.13□□□□□ -0.79
HMGCS1-202ENST00000433297 IGKV1-9A0A0C4DH69 117 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 FAM230AA0A1W2PPH8 454 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 CTSDP07339 412 aaPredicted RBP10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 DBHP09172 617 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 FOLR1P15328 257 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 SUCLG1P53597 346 aaKnown RBP10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 MFAP5Q13361 173 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 C1orf87Q8N0U7 546 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 OR14L1PQ8NHC6 308 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 M1APQ8TC57 530 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 C2orf88Q9BSF0 95 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 LIME1Q9H400 295 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 OR14J1Q9UGF5 321 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 C5orf63A6NC05 138 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 DUSP1P28562 367 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 ALDH3B1P43353 468 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 PPA1Q15181 289 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 TAF9Q16594 264 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 SPPL3Q8TCT6 385 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 GPBAR1Q8TDU6 330 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 TMEM68Q96MH6 324 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 NUDT16L1Q9BRJ7 211 aaKnown RBP10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 CUTCQ9NTM9 273 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 MED12Q93074 2177 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 F5H5K5 113 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 FGF7P21781 194 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 DAP3P51398 398 aaKnown RBP10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 PRSS12P56730 875 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 HSD17B7P56937 341 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 HSD11B2P80365 405 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 TCEAL6Q6IPX3 200 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms