RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 ENDOGQ14249 297 aaKnown RBP13.65□□□□□ -0.22
TVP23C-203ENST00000428082 SURF2Q15527 256 aaPredicted RBP13.65□□□□□ -0.22
TVP23C-203ENST00000428082 SLC16A14Q7RTX9 510 aa13.65□□□□□ -0.22
TVP23C-203ENST00000428082 TMEM123Q8N131 208 aa13.65□□□□□ -0.22
TVP23C-203ENST00000428082 ADAD2Q8NCV1 583 aaKnown RBP13.65□□□□□ -0.22
TVP23C-203ENST00000428082 OR52H1Q8NGJ2 320 aa13.65□□□□□ -0.22
TVP23C-203ENST00000428082 LINC00052Q96N35 136 aa13.65□□□□□ -0.22
TVP23C-203ENST00000428082 SPACA5Q96QH8 159 aa13.65□□□□□ -0.22
TVP23C-203ENST00000428082 TM2D1Q9BX74 207 aa13.65□□□□□ -0.22
TVP23C-203ENST00000428082 ZNF471Q9BX82 626 aaPredicted RBP13.65□□□□□ -0.22
TVP23C-203ENST00000428082 CHST5Q9GZS9 411 aa13.65□□□□□ -0.22
TVP23C-203ENST00000428082 BANF2Q9H503 90 aa13.65□□□□□ -0.22
TVP23C-203ENST00000428082 IGKV1-9A0A0C4DH69 117 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 AQP7O14520 342 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 SMAD9O15198 467 aaKnown RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 SFT2D2O95562 160 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 CPT2P23786 658 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 TMEM50BP56557 158 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 KLRB1Q12918 225 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 LRRC37A5PQ49AS3 106 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 PRR30Q53SZ7 412 aaPredicted RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 PDSS1Q5T2R2 415 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 ZNF324BQ6AW86 544 aaPredicted RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 PLXDC2Q6UX71 529 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 MOB3CQ70IA8 216 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 ARHGAP5-AS1Q96IT6 56 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 ULBP2Q9BZM5 246 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 CHMP1AQ9HD42 196 aaPredicted RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 F5H5K5 113 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 SCO1O75880 301 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 CRHP06850 196 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 HOXD4P09016 255 aaPredicted RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 MRPS34P82930 218 aaKnown RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 PAN3Q58A45 887 aaKnown RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 FAM27BQ5VT28 67 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 PEG10Q86TG7 708 aaKnown RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 C20orf196Q8IYI0 205 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 OR10K1Q8NGX5 313 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 ROBO4Q8WZ75 1007 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 NABP1Q96AH0 204 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 SNRNP40Q96DI7 357 aaKnown RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 SOX7Q9BT81 388 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 RBM24Q9BX46 236 aaKnown RBP13.64□□□□□ -0.23
TVP23C-203ENST00000428082 SHARPINQ9H0F6 387 aa13.64□□□□□ -0.23
TVP23C-203ENST00000428082 GTF3C1Q12789 2109 aa13.63□□□□□ -0.23
TVP23C-203ENST00000428082 TRBV6-7A0A0A0MS04 114 aa13.63□□□□□ -0.23
TVP23C-203ENST00000428082 RNF222A6NCQ9 220 aa13.63□□□□□ -0.23
TVP23C-203ENST00000428082 EEF1E1-BLOC1S5C9J1V9 151 aa13.63□□□□□ -0.23
TVP23C-203ENST00000428082 M0R135 149 aa13.63□□□□□ -0.23
TVP23C-203ENST00000428082 SERPINF1P36955 418 aa13.63□□□□□ -0.23
TVP23C-203ENST00000428082 LUMP51884 338 aaPredicted RBP13.63□□□□□ -0.23
TVP23C-203ENST00000428082 CPNE4Q96A23 557 aaPredicted RBP13.63□□□□□ -0.23
TVP23C-203ENST00000428082 ZNF799Q96GE5 643 aa13.63□□□□□ -0.23
TVP23C-203ENST00000428082 LYZL4Q96KX0 146 aa13.63□□□□□ -0.23
TVP23C-203ENST00000428082 PRDM14Q9GZV8 571 aa13.63□□□□□ -0.23
TVP23C-203ENST00000428082 FOXD3Q9UJU5 478 aaPredicted RBP13.63□□□□□ -0.23
TVP23C-203ENST00000428082 LOC105371267A0A1B0GV96 52 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 C13orf42A0A1B0GVH6 325 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 F5H0A9 414 aaPredicted RBP13.62□□□□□ -0.23
TVP23C-203ENST00000428082 PET100P0DJ07 73 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 SFTPCP11686 197 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 SNTB1Q13884 538 aaKnown RBP13.62□□□□□ -0.23
TVP23C-203ENST00000428082 TUSC1Q2TAM9 212 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 DRAM2Q6UX65 266 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 LHFPL1Q86WI0 220 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 STPG2Q8N412 459 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 SPERTQ8NA61 448 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 CSNK2A3Q8NEV1 391 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 EMG1Q92979 244 aaKnown RBP13.62□□□□□ -0.23
TVP23C-203ENST00000428082 SPSB1Q96BD6 273 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 SARAFQ96BY9 339 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 ZNF385AQ96PM9 386 aaKnown RBP13.62□□□□□ -0.23
TVP23C-203ENST00000428082 FN3KRPQ9HA64 309 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 ASF1BQ9NVP2 202 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 PLEK2Q9NYT0 353 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 MBD2Q9UBB5 411 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 PIGLQ9Y2B2 252 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 PHF3Q92576 2039 aaKnown RBP13.62□□□□□ -0.23
TVP23C-203ENST00000428082 FIGNL2A6NMB9 653 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 FOXI3A8MTJ6 420 aaPredicted RBP13.62□□□□□ -0.23
TVP23C-203ENST00000428082 FCGR2AP12318 317 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 BLVRBP30043 206 aaPredicted RBP13.62□□□□□ -0.23
TVP23C-203ENST00000428082 TDGF1P3P51864 188 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 NAAAQ02083 359 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 RAB35Q15286 201 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 UQCC3Q6UW78 93 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 STOML3Q8TAV4 291 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 PECRQ9BY49 303 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 C5orf66Q9H5L9 145 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 ZNF391Q9UJN7 358 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 EDARQ9UNE0 448 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 SPTA1P02549 2419 aa13.62□□□□□ -0.23
TVP23C-203ENST00000428082 TEX13DA0A0J9YY54 714 aaPredicted RBP13.61□□□□□ -0.23
TVP23C-203ENST00000428082 RAD51DO75771 328 aa13.61□□□□□ -0.23
TVP23C-203ENST00000428082 TPT1P13693 172 aaKnown RBP13.61□□□□□ -0.23
TVP23C-203ENST00000428082 PRKACBP22694 351 aa13.61□□□□□ -0.23
TVP23C-203ENST00000428082 NPY4RP50391 375 aa13.61□□□□□ -0.23
TVP23C-203ENST00000428082 SNU13P55769 128 aaKnown RBP13.61□□□□□ -0.23
TVP23C-203ENST00000428082 CHRFAM7AQ494W8 412 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms