RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 COPS3Q9UNS2 423 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 SYNGR1O43759 233 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 CHST1O43916 411 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 IGLV3-1P01715 115 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 TTRP02766 147 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 PIPP12273 146 aaPredicted RBP13.11□□□□□ -0.31
COL18A1-205ENST00000423214 CCL3L1P16619 93 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 PRDX2P32119 198 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 ROM1Q03395 351 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 BEAN1Q3B7T3 259 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 PLA1AQ53H76 456 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 TMEM200BQ69YZ2 307 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 KDM4DQ6B0I6 523 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 HIST2H2BDQ6DRA6 164 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 ASRGL1Q7L266 308 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 BATF2Q8N1L9 274 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 FOXRED1Q96CU9 486 aaPredicted RBP13.11□□□□□ -0.31
COL18A1-205ENST00000423214 ABCB10Q9NRK6 738 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 GPR173Q9NS66 373 aa13.11□□□□□ -0.31
COL18A1-205ENST00000423214 PRR32B1ATL7 298 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 POLR2IP36954 125 aaKnown RBP13.1□□□□□ -0.31
COL18A1-205ENST00000423214 ACTR3P61158 418 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 ZNF273Q14593 569 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 ARSJQ5FYB0 599 aaPredicted RBP13.1□□□□□ -0.31
COL18A1-205ENST00000423214 SLX4IPQ5VYV7 408 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 CRIP3Q6Q6R5 217 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 ASCC1Q8N9N2 400 aaKnown RBP13.1□□□□□ -0.31
COL18A1-205ENST00000423214 PYDC1Q8WXC3 89 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 CFHR4Q92496 578 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 AJUBAQ96IF1 538 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 IL4I1Q96RQ9 567 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 CIB1Q99828 191 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 PLEKHA1Q9HB21 404 aa13.1□□□□□ -0.31
COL18A1-205ENST00000423214 H2AFY2Q9P0M6 372 aaPredicted RBP13.1□□□□□ -0.31
COL18A1-205ENST00000423214 SAC3D1A6NKF1 404 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 ZAR1LA6NP61 321 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 DLGAP1O14490 977 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 FBXO24O75426 580 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 TK1P04183 234 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 FCGR1AP12314 374 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 CXCR4P61073 352 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 EFNB1P98172 346 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 C12orf73Q69YU5 71 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 ZNF322Q6U7Q0 402 aaPredicted RBP13.09□□□□□ -0.31
COL18A1-205ENST00000423214 MEPCEQ7L2J0 689 aaKnown RBP13.09□□□□□ -0.31
COL18A1-205ENST00000423214 LHFPL4Q7Z7J7 247 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 SLC35F2Q8IXU6 374 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 OR4S1Q8NGB4 309 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 RPS4Y2Q8TD47 263 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 PPP1R14AQ96A00 147 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 NRIP2Q9BQI9 281 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 GABARAPL1Q9H0R8 117 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 PITPNC1Q9UKF7 332 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 NOTCH3Q9UM47 2321 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 OAZ3Q9UMX2 235 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 TBL2Q9Y4P3 447 aaKnown RBP13.09□□□□□ -0.31
COL18A1-205ENST00000423214 R4GMQ9 66 aa13.09□□□□□ -0.31
COL18A1-205ENST00000423214 PQLC2LA1A4F0 135 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 ZNF670-ZNF695F2Z2N8 137 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 MAGEB4O15481 346 aaPredicted RBP13.08□□□□□ -0.32
COL18A1-205ENST00000423214 NOS1APO75052 506 aaPredicted RBP13.08□□□□□ -0.32
COL18A1-205ENST00000423214 PEX14O75381 377 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 ARG1P05089 322 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 EDDM3BP56851 147 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 FAM189A2Q15884 450 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 NSUN5P1Q3KNT7 163 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 SAMD5Q5TGI4 173 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 AADACL4Q5VUY2 407 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 PLEKHG7Q6ZR37 379 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 CCDC121Q6ZUS5 278 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 GDPD3Q7L5L3 318 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 CALHM1Q8IU99 346 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 LYG1Q8N1E2 194 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 OR13D1Q8NGV5 346 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 TRMT10AQ8TBZ6 339 aaKnown RBP13.08□□□□□ -0.32
COL18A1-205ENST00000423214 TMEM163Q8TC26 289 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 CENPNQ96H22 339 aaPredicted RBP13.08□□□□□ -0.32
COL18A1-205ENST00000423214 MNTQ99583 582 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 OR52A1Q9UKL2 312 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 TCF19Q9Y242 345 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 V9GYS6 101 aa13.08□□□□□ -0.32
COL18A1-205ENST00000423214 KIAA2026Q5HYC2 2103 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 DHRS7CA6NNS2 312 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 PIN1P1O15428 100 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 SRSF10O75494 262 aaKnown RBP13.07□□□□□ -0.32
COL18A1-205ENST00000423214 MPZP25189 248 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 COL10A1Q03692 680 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 KPNB1Q14974 876 aaKnown RBP13.07□□□□□ -0.32
COL18A1-205ENST00000423214 KPRPQ5T749 579 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-205ENST00000423214 NXNL2Q5VZ03 156 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 TMEM42Q69YG0 159 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 REC114Q7Z4M0 266 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 ELMOD2Q8IZ81 293 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 C11orf42Q8N5U0 333 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 APOL4Q9BPW4 351 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 PKIBQ9C010 78 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 ZNF702PQ9H963 129 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 HES4Q9HCC6 221 aa13.07□□□□□ -0.32
COL18A1-205ENST00000423214 SLC7A11Q9UPY5 501 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms