RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ANKRD30BLA7E2S9 258 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 SMLR1H3BR10 107 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 HTR3BO95264 441 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 HPXP02790 462 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 GSTP1P09211 210 aaKnown RBP17.94■□□□□ 0.46
GPC1-202ENST00000420138 RAC2P15153 192 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 MECP2P51608 486 aaKnown RBP17.94■□□□□ 0.46
GPC1-202ENST00000420138 PSG7Q13046 419 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 C22orf34Q6ZV56 151 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 MRGPRGQ86SM5 289 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 ASCC1Q8N9N2 400 aaKnown RBP17.94■□□□□ 0.46
GPC1-202ENST00000420138 ZSCAN4Q8NAM6 433 aaPredicted RBP17.94■□□□□ 0.46
GPC1-202ENST00000420138 RELL2Q8NC24 303 aaPredicted RBP17.94■□□□□ 0.46
GPC1-202ENST00000420138 ST6GALNAC3Q8NDV1 305 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 MED30Q96HR3 178 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 HYLS1Q96M11 299 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.94■□□□□ 0.46
GPC1-202ENST00000420138 JKAMPQ9P055 326 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 ZNF581Q9P0T4 197 aa17.94■□□□□ 0.46
GPC1-202ENST00000420138 ZNF732B4DXR9 585 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 EEF1E1-BLOC1S5C9J1V9 151 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 FABP7O15540 132 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 ZNF780AO75290 641 aaPredicted RBP17.93■□□□□ 0.46
GPC1-202ENST00000420138 CA6P23280 308 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 CPT2P23786 658 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 CCKARP32238 428 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 MPV17P39210 176 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 DAZAP2Q15038 168 aaPredicted RBP17.93■□□□□ 0.46
GPC1-202ENST00000420138 RBMS2Q15434 407 aaKnown RBP17.93■□□□□ 0.46
GPC1-202ENST00000420138 SIGIRRQ6IA17 410 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 SLC25A26Q70HW3 274 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 TRAPPC6BQ86SZ2 158 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 TMEM229BQ8NBD8 167 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 Q8NFD4 153 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 OR51F2Q8NH61 342 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 KLF14Q8TD94 323 aaPredicted RBP17.93■□□□□ 0.46
GPC1-202ENST00000420138 SLA2Q9H6Q3 261 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 SPTA1P02549 2419 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 IL5P05113 134 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 CXCL3P19876 107 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 BLVRBP30043 206 aaPredicted RBP17.93■□□□□ 0.46
GPC1-202ENST00000420138 RCVRNP35243 200 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 TAS2R19P59542 299 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 NDUFA5Q16718 116 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 SEZ6L2Q6UXD5 910 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 GLDNQ6ZMI3 551 aaPredicted RBP17.93■□□□□ 0.46
GPC1-202ENST00000420138 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
GPC1-202ENST00000420138 GVQW1Q8N7I0 195 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 ST8SIA4Q92187 359 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 CNTNAP3BQ96NU0 1288 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 DMRTA2Q96SC8 542 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 CNTNAP3Q9BZ76 1288 aa17.93■□□□□ 0.46
GPC1-202ENST00000420138 ZNF107Q9UII5 783 aaPredicted RBP17.93■□□□□ 0.46
GPC1-202ENST00000420138 RP1L1Q8IWN7 2480 aaPredicted RBP17.93■□□□□ 0.46
GPC1-202ENST00000420138 MEIKINA0A087WXM9 373 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 IQCF6A8MYZ5 107 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 CSTBP04080 98 aaKnown RBP17.92■□□□□ 0.46
GPC1-202ENST00000420138 RAD52P43351 418 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 HAAOP46952 286 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 NPBWR2P48146 333 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 CASP6P55212 293 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 NAAAQ02083 359 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 IGFBP7Q16270 282 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 STEAP1BQ6NZ63 245 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 OR8S1Q8NH09 359 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 PECRQ9BY49 303 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 RANBP3Q9H6Z4 567 aaPredicted RBP17.92■□□□□ 0.46
GPC1-202ENST00000420138 ANAPC10Q9UM13 185 aa17.92■□□□□ 0.46
GPC1-202ENST00000420138 TRGV8A0A0C4DH27 118 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 CD74P04233 296 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 ZNF83P51522 516 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 PNLIPRP3Q17RR3 467 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 C3orf36Q3SXR2 165 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 OSR2Q8N2R0 312 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 OR4S1Q8NGB4 309 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 GINS4Q9BRT9 223 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 GPN1Q9HCN4 374 aaPredicted RBP17.91■□□□□ 0.46
GPC1-202ENST00000420138 OR5B21A6NL26 309 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 GSTT2P0CG29 244 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 GABRR1P24046 479 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 TAF9Q16594 264 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 PIGYQ3MUY2 71 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 Q5BKY6 102 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 TMEM200AQ86VY9 491 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 SAXO1Q8IYX7 474 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 FBXL14Q8N1E6 418 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 MRPS24Q96EL2 167 aaKnown RBP17.91■□□□□ 0.46
GPC1-202ENST00000420138 HIST1H2AAQ96QV6 131 aa17.91■□□□□ 0.46
GPC1-202ENST00000420138 PRR14LQ5THK1 2151 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 F8VVB4 439 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 F8VWA3 439 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 AKR7A2O43488 359 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 ANXA7P20073 488 aaKnown RBP17.9■□□□□ 0.46
GPC1-202ENST00000420138 TUBG1P23258 451 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 PPA1Q15181 289 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 VKORC1Q9BQB6 163 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 SEC22CQ9BRL7 303 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 GON7Q9BXV9 100 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 BCL2L14Q9BZR8 327 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 NPDC1Q9NQX5 325 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms