RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MTCH1Q9NZJ7 389 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 PNPP00491 289 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 GUCA2AQ02747 115 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 LINC00303Q3SY05 128 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 DMKNQ6E0U4 476 aaPredicted RBP15.28■□□□□ 0.04
PHRF1-202ENST00000413872 TMEM52Q8NDY8 209 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 OR2H1Q9GZK4 316 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 SLC25A32Q9H2D1 315 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 TMEM38BQ9NVV0 291 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 TUBAL3A6NHL2 446 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 OGG1O15527 345 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 MPZL1O95297 269 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 ETFRF1Q6IPR1 90 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 ZNF770Q6IQ21 691 aaPredicted RBP15.28■□□□□ 0.04
PHRF1-202ENST00000413872 ZAR1Q86SH2 424 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 OR10V1Q8NGI7 309 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 PATZ1Q9HBE1 687 aaKnown RBP15.28■□□□□ 0.04
PHRF1-202ENST00000413872 OR7C2O60412 319 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 TMEM11P17152 192 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 TMEM41BQ5BJD5 291 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 ERRFI1Q9UJM3 462 aaPredicted RBP15.28■□□□□ 0.04
PHRF1-202ENST00000413872 SCN10AQ9Y5Y9 1956 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 XKRY2A2RUG3 117 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 FBP1P09467 338 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 CD96P40200 585 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 BAP18Q8IXM2 172 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 TPPP3Q9BW30 176 aa15.28■□□□□ 0.04
PHRF1-202ENST00000413872 IGHV1-45A0A0A0MS14 117 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 TO15178 435 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 CTAG2O75638 210 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 RPS2P15880 293 aaKnown RBP15.27■□□□□ 0.04
PHRF1-202ENST00000413872 C8orf82Q6P1X6 216 aaPredicted RBP15.27■□□□□ 0.04
PHRF1-202ENST00000413872 ZNF441Q8N8Z8 693 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 OR5V1Q9UGF6 321 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 COX7A2P2O60397 106 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 NDUFB6O95139 128 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 CCL2P13500 99 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 C1orf185Q5T7R7 199 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 HIST2H3AQ71DI3 136 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 ASCL5Q7RTU5 278 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 OR8B3Q8NGG8 313 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 MOB3AQ96BX8 217 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 OR8B2Q96RD0 313 aa15.27■□□□□ 0.04
PHRF1-202ENST00000413872 NUDT16L1Q9BRJ7 211 aaKnown RBP15.27■□□□□ 0.04
PHRF1-202ENST00000413872 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.27■□□□□ 0.04
PHRF1-202ENST00000413872 ZP4Q12836 540 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 SSX2Q16385 188 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 C3AR1Q16581 482 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 DBX2Q6ZNG2 339 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 OR2T6Q8NHC8 308 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 RBPMSQ93062 196 aaKnown RBP15.27■□□□□ 0.03
PHRF1-202ENST00000413872 FBXW5Q969U6 566 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 ZNF331Q9NQX6 463 aaPredicted RBP15.27■□□□□ 0.03
PHRF1-202ENST00000413872 FFAR1O14842 300 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 FGF2P09038 288 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 RAG2P55895 527 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 CCDC71Q8IV32 467 aaPredicted RBP15.27■□□□□ 0.03
PHRF1-202ENST00000413872 OR10AD1Q8NGE0 317 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 ABHD3Q8WU67 409 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 ANGPTL4Q9BY76 406 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 TINAGL1Q9GZM7 467 aaPredicted RBP15.27■□□□□ 0.03
PHRF1-202ENST00000413872 RNF32Q9H0A6 362 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 SAP30LQ9HAJ7 183 aa15.27■□□□□ 0.03
PHRF1-202ENST00000413872 CALCRP30988 508 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 SRP14P37108 136 aaKnown RBP15.26■□□□□ 0.03
PHRF1-202ENST00000413872 OR2B8PP59922 312 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 BAK1Q16611 211 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 PLPPR5Q32ZL2 321 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 XAF1Q6GPH4 301 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 TIPARPQ7Z3E1 657 aaKnown RBP15.26■□□□□ 0.03
PHRF1-202ENST00000413872 SCARF2Q96GP6 870 aaPredicted RBP15.26■□□□□ 0.03
PHRF1-202ENST00000413872 FAAP24Q9BTP7 215 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 THYN1Q9P016 225 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 CCL21O00585 134 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 RRASP10301 218 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 OR3A4PP47883 348 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 ETFDHQ16134 617 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 OR4D11Q8NGI4 311 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 ADGRG7Q96K78 797 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 MAGT1Q9H0U3 335 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 CNTD2Q9H8S5 307 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 PSG11Q9UQ72 335 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 PPP1R1CQ8WVI7 109 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 TMED6Q8WW62 240 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 CHRDL1Q9BU40 450 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 NARFLQ9H6Q4 476 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 RNF7Q9UBF6 113 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 DVL1O14640 695 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 KRASP01116 189 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 IGHA1P01876 353 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 DVL1P1P54792 670 aaPredicted RBP15.26■□□□□ 0.03
PHRF1-202ENST00000413872 TOR2AQ5JU69 321 aa15.26■□□□□ 0.03
PHRF1-202ENST00000413872 SLIRPQ9GZT3 109 aaKnown RBP15.26■□□□□ 0.03
PHRF1-202ENST00000413872 AHRRA9YTQ3 701 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 J3QT63 122 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 ZNF883P0CG24 379 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 BRS3P32247 399 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 P2RY6Q15077 328 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 SSX1Q16384 188 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms