RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 NOP16Q9Y3C1 178 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-202ENST00000409364 FAM90A10PA6NDY2 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 MBD3L4A6NDZ8 208 aaPredicted RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A18PA6NE21 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 MBD3L3A6NE82 208 aaPredicted RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A16PA6NEW6 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A20PA6NIJ5 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 MBD3L5A6NJ08 208 aaPredicted RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A8PA6NJQ4 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A7PA6NKC0 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FIGNL2A6NMB9 653 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A22PA8MWA6 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A12PA8MX19 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A5PA8MXJ8 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A23PA8MXZ1 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 RGS13O14921 159 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 ANGPTL7O43827 346 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 WDR1O75083 606 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 RAD51DO75771 328 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 PMP2P02689 132 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 CSN2P05814 226 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 GIPP09681 153 aaPredicted RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 OR4E1P0C645 316 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A15PP0C7V4 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A13PP0C7W8 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A14PP0C7W9 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FAM90A24PP0C7X0 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 SELEP16581 610 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 AMY2BP19961 511 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 IL32P24001 234 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 GABRR1P24046 479 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 WNT5AP41221 380 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 TSPAN5P62079 268 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 HLXQ14774 488 aaPredicted RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 MPPED2Q15777 294 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 GRK1Q15835 563 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 TAF9Q16594 264 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 NKPD1Q17RQ9 610 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 PLEKHN1Q494U1 663 aaPredicted RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 ATPAF1Q5TC12 328 aaPredicted RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 ELP2Q6IA86 826 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 OR52W1Q6IF63 320 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 FBXW12Q6X9E4 464 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 BEND4Q6ZU67 534 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 SLC25A42Q86VD7 318 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 ZNF573Q86YE8 665 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 C1orf174Q8IYL3 243 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 MUC20Q8N307 709 aaPredicted RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 C17orf78Q8N4C9 275 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 RBMXL3Q8N7X1 1067 aaKnown RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 ZNF611Q8N823 705 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 OR5AP2Q8NGF4 316 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 OR13C8Q8NGS7 320 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 OR5H2Q8NGV7 314 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 MBD3L2Q8NHZ7 208 aaPredicted RBP5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 GPR137Q96N19 417 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 TMEM246Q9BRR3 403 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 POFUT1Q9H488 388 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 PLK3Q9H4B4 646 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 SLA2Q9H6Q3 261 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 DLL4Q9NR61 685 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 MGAT4CQ9UBM8 478 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 DKK4Q9UBT3 224 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 PROCRQ9UNN8 238 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 ST3GAL6Q9Y274 331 aa5.4□□□□□ -1.55
GTF3C3-202ENST00000409364 IGKV1-12A0A0C4DH73 117 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 OR5B21A6NL26 309 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 CEACAM18A8MTB9 384 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 ZNF732B4DXR9 585 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 TRAPPC2LH3BP13 241 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 LYZL6O75951 148 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 PLATP00750 562 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 CGAP01215 116 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 IL2RAP01589 272 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 IGKV1D-12P01611 117 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 TPOP07202 933 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 RAC2P15153 192 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 COX5AP20674 150 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 C4BPBP20851 252 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 FUT3P21217 361 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 DTYMKP23919 212 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 DNASE1P24855 282 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 CHATP28329 748 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 HAAOP46952 286 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 SNU13P55769 128 aaKnown RBP5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 UCP2P55851 309 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 TAS2R31P59538 309 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 UBE2MP61081 183 aaKnown RBP5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 GNG3P63215 75 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 IFITM2Q01629 132 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 NDUFA5Q16718 116 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 MICBQ29980 383 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 TMEM95Q3KNT9 176 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 CHRFAM7AQ494W8 412 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 SLC25A26Q70HW3 274 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 NLRC3Q7RTR2 1065 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 C6orf201Q7Z4U5 140 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 TMED4Q7Z7H5 227 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 FBXL14Q8N1E6 418 aa5.39□□□□□ -1.55
GTF3C3-202ENST00000409364 C12orf45Q8N5I9 185 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms