RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 GAGE2BQ13066 116 aa8.62□□□□□ -1.03
SMAD9-203ENST00000399275 GAGE2EQ4V326 116 aa8.62□□□□□ -1.03
SMAD9-203ENST00000399275 ZNF770Q6IQ21 691 aaPredicted RBP8.62□□□□□ -1.03
SMAD9-203ENST00000399275 RGS7BPQ6MZT1 257 aaPredicted RBP8.62□□□□□ -1.03
SMAD9-203ENST00000399275 GTF3AQ92664 365 aaKnown RBP8.62□□□□□ -1.03
SMAD9-203ENST00000399275 GABRG3Q99928 467 aa8.62□□□□□ -1.03
SMAD9-203ENST00000399275 BARX1Q9HBU1 254 aaPredicted RBP8.62□□□□□ -1.03
SMAD9-203ENST00000399275 ELOVL5Q9NYP7 299 aa8.62□□□□□ -1.03
SMAD9-203ENST00000399275 GAGE2DQ9UEU5 116 aa8.62□□□□□ -1.03
SMAD9-203ENST00000399275 ZMIZ1Q9ULJ6 1067 aa8.62□□□□□ -1.03
SMAD9-203ENST00000399275 ARFGEF1Q9Y6D6 1849 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 C19orf67A6NJJ6 358 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 ETHE1O95571 254 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 PF4V1P10720 104 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 IAPPP10997 89 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 IRF2P14316 349 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 PNLIPRP2P54317 469 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 MTCP1P56278 107 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 SCAND1P57086 179 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 DUSP8Q13202 625 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 PRICKLE4Q2TBC4 344 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 TPTE2P1Q5T6R2 138 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 TMEM229BQ8NBD8 167 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 TMEM208Q9BTX3 173 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 GTSF1LQ9H1H1 148 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 SLC52A3Q9NQ40 469 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 TMEM262E9PQX1 116 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 F11P03951 625 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 ADH4P08319 380 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 BCL3P20749 454 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 MGAT2Q10469 447 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 OR1C1Q15619 314 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 TCTN1Q2MV58 587 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 ABHD17CQ6PCB6 329 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 NPSR1Q6W5P4 371 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 STAC2Q6ZMT1 411 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 H2BFWTQ7Z2G1 175 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 MRPS24Q96EL2 167 aaKnown RBP8.61□□□□□ -1.03
SMAD9-203ENST00000399275 SMDT1Q9H4I9 107 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.61□□□□□ -1.03
SMAD9-203ENST00000399275 B4DGG1 531 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 SLC25A5P05141 298 aaKnown RBP8.61□□□□□ -1.03
SMAD9-203ENST00000399275 MUC1P15941 1255 aaPredicted RBP8.61□□□□□ -1.03
SMAD9-203ENST00000399275 DHRS2Q13268 280 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 EXOSC7Q15024 291 aaKnown RBP8.61□□□□□ -1.03
SMAD9-203ENST00000399275 RAET1LQ5VY80 246 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 BEND2Q8NDZ0 799 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 OR5D18Q8NGL1 313 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 FAM234AQ9H0X4 552 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 TLNRD1Q9H1K6 362 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 KCND3Q9UK17 655 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 CDC42EP3Q9UKI2 254 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 CRYM-AS1A6NIL9 109 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 APCSP02743 223 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 MT-ND6P03923 174 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 ATF1P18846 271 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 MC5RP33032 325 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 GLIPR1L1Q6UWM5 242 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 RGP1Q92546 391 aaPredicted RBP8.61□□□□□ -1.03
SMAD9-203ENST00000399275 MOB3AQ96BX8 217 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 MRPL37Q9BZE1 423 aaKnown RBP8.61□□□□□ -1.03
SMAD9-203ENST00000399275 CGGBP1Q9UFW8 167 aaPredicted RBP8.61□□□□□ -1.03
SMAD9-203ENST00000399275 CCL27Q9Y4X3 112 aa8.61□□□□□ -1.03
SMAD9-203ENST00000399275 A6NNC1 897 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 M0R3E3 92 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 SDCBPO00560 298 aaPredicted RBP8.6□□□□□ -1.03
SMAD9-203ENST00000399275 IL4P05112 153 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 AREGP15514 252 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 MMP16P51512 607 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 RAB38P57729 211 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 FCRL6Q6DN72 434 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 DCBLD2Q96PD2 775 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 NDFIP1Q9BT67 221 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 NPIPB8E9PQR5 432 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 EIF4E2O60573 245 aaKnown RBP8.6□□□□□ -1.03
SMAD9-203ENST00000399275 LDB3O75112 727 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 PCBP3P57721 371 aaKnown RBP8.6□□□□□ -1.03
SMAD9-203ENST00000399275 RAE1P78406 368 aaKnown RBP8.6□□□□□ -1.03
SMAD9-203ENST00000399275 CLDND1Q9NY35 253 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 STRCQ7RTU9 1775 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 CSRP3P50461 194 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 DLX2Q07687 328 aaPredicted RBP8.6□□□□□ -1.03
SMAD9-203ENST00000399275 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
SMAD9-203ENST00000399275 OLIG3Q7RTU3 272 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 SLAMF6Q96DU3 332 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 TCTN2Q96GX1 697 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 C2orf88Q9BSF0 95 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 SLC17A5Q9NRA2 495 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 PSG11Q9UQ72 335 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 SERINC4A6NH21 518 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 H3BMH7 237 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 H7C2G1 150 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 ICOSLGO75144 302 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 NPIPB7O75200 414 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 FCARP24071 287 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 TMEM33P57088 247 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 EGR3Q06889 387 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 KHDC3LQ587J8 217 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms