RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NGFP01138 241 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 CD37P11049 281 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 TAAR6Q96RI8 345 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 CHRNA10Q9GZZ6 450 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 PPP1R3EQ9H7J1 279 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 C19orf12Q9NSK7 152 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 A0A1W2PR80 420 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 LYZL6O75951 148 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 SCAF4O95104 1147 aaKnown RBP12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 OR13C7P0DN81 318 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 CPN1P15169 458 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 MAGEA5P43359 124 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 FAM74A1Q5RGS3 127 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 FAHD2BQ6P2I3 314 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 TUSC5Q8IXB3 177 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 SAP25Q8TEE9 199 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 FAHD2AQ96GK7 314 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 A0A1W2PPC1 479 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 MT-ND4LP03901 98 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 ADIPOR1Q96A54 375 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 FN3KRPQ9HA64 309 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 TAAR3PQ9P1P4 343 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 CT45A6P0DMU7 189 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 CT45A5P0DMU8 189 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 CT45A7P0DMV0 189 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 IAPPP10997 89 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 TAGLN2P37802 199 aaKnown RBP12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 SOX8P57073 446 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 CT45A1Q5HYN5 189 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 AVPI1Q5T686 147 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 OR2Z1Q8NG97 314 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 CT45A3Q8NHU0 189 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 PSENENQ9NZ42 101 aa12.56□□□□□ -0.4
PCDHGA11-201ENST00000398587 IGF2P01344 180 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 CTSBP07858 339 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 ADRB1P08588 477 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 CCL2P13500 99 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 CD82P27701 267 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 CD300CQ08708 224 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 MGAT2Q10469 447 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 LAIR2Q6ISS4 152 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 OR10X1Q8NGY0 326 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 CORO2AQ92828 525 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 GPR35Q9HC97 309 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 MDFIC2A0A1B0GVS7 189 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 PGA3P0DJD8 388 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 ZNF83P51522 516 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 PPP1CBP62140 327 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 IFITM3Q01628 133 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 HES1Q14469 280 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 SLC35E1Q96K37 410 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 PECRQ9BY49 303 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 TMEM38BQ9NVV0 291 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 KLHDC2Q9Y2U9 406 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 DICER1Q9UPY3 1922 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 TRGV10A0A0A0MS01 117 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 ABCD4O14678 606 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 SPRY3O43610 288 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 ACKR3P25106 362 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 OR2M7Q8NG81 312 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 ABHD3Q8WU67 409 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 PCDHGA9Q9Y5G4 932 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 A0A0J9YW62 118 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 SURF2Q15527 256 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 RPUSD3Q6P087 351 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 CD200R1LQ6Q8B3 271 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 THNSL2Q86YJ6 484 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 LHX4Q969G2 390 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 NKX6-2Q9C056 277 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 ERRFI1Q9UJM3 462 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 PILRBQ9UKJ0 227 aa12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 RCL1Q9Y2P8 373 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-201ENST00000398587 TRPM7Q96QT4 1865 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 GREB1Q4ZG55 1949 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 SOCS1O15524 211 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 ZBTB25P24278 435 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 MDH2P40926 338 aaKnown RBP12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 ADIRFQ15847 76 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 ZNF385AQ96PM9 386 aaKnown RBP12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 OR2H1Q9GZK4 316 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 ABCA7Q8IZY2 2146 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 CNIH1O95406 144 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 SULT1A3P0DMM9 295 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 SULT1A4P0DMN0 295 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 SDHBP21912 280 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 ARL3P36405 182 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 LTBRP36941 435 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 LIMK1P53667 647 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 LCN15Q6UWW0 184 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 TMPRSS7Q7RTY8 843 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 CXorf67Q86X51 503 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 RPS4Y2Q8TD47 263 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 COMMD5Q9GZQ3 224 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 CLEC18AA5D8T8 446 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 GALR2O43603 387 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 GABRA1P14867 456 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 KIR3DL2P43630 455 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 KCNJ3P48549 501 aa12.54□□□□□ -0.4
PCDHGA11-201ENST00000398587 PRSS12P56730 875 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms