RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ERGIC1Q969X5 290 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 HIST1H2AAQ96QV6 131 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 TOLLIPQ9H0E2 274 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 HS3ST1O14792 307 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 ST8SIA3O43173 380 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 BGLAPP02818 100 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 ACAA1P09110 424 aaPredicted RBP11.65□□□□□ -0.54
NFKB1-202ENST00000394820 G0S2P27469 103 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 PPP1CCP36873 323 aaKnown RBP11.65□□□□□ -0.54
NFKB1-202ENST00000394820 ZNF239Q16600 458 aaKnown RBP11.65□□□□□ -0.54
NFKB1-202ENST00000394820 IZUMO4Q1ZYL8 232 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 CYB5R2Q6BCY4 276 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 OR8G2PQ6IF36 304 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 LILRB2Q8N423 598 aa11.65□□□□□ -0.54
NFKB1-202ENST00000394820 AURKAIP1Q9NWT8 199 aaPredicted RBP11.65□□□□□ -0.54
NFKB1-202ENST00000394820 A0A096LPE4 126 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 A0A1W2PPZ6 126 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 SMCO3A2RU48 225 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 FRG2CA6NGY1 282 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 NDUFS6O75380 124 aaKnown RBP11.64□□□□□ -0.55
NFKB1-202ENST00000394820 IFNA5P01569 189 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 MMP9P14780 707 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 HNF1AP20823 631 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 SULT1A1P50225 295 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 NXPH1P58417 271 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 GUSBP11Q6P575 273 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 LINC00114Q6XXX2 140 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 C5orf24Q7Z6I8 188 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 YRDCQ86U90 279 aaKnown RBP11.64□□□□□ -0.55
NFKB1-202ENST00000394820 THNSL2Q86YJ6 484 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 OR13G1Q8NGZ3 307 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 OR14L1PQ8NHC6 308 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 CPNE4Q96A23 557 aaPredicted RBP11.64□□□□□ -0.55
NFKB1-202ENST00000394820 ZMAT5Q9UDW3 170 aaKnown RBP11.64□□□□□ -0.55
NFKB1-202ENST00000394820 PKDREJQ9NTG1 2253 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 ARHGAP21Q5T5U3 1957 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 A0A1W2PR77 199 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 RAMP1O60894 148 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 SCRG1O75711 98 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 SERPINE2P07093 398 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 RNF4P78317 190 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 S100A12P80511 92 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 OR2T2Q6IF00 324 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 UQCC3Q6UW78 93 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 ZDHHC22Q8N966 263 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 SLC38A9Q8NBW4 561 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 AKIRIN1Q9H9L7 192 aaPredicted RBP11.64□□□□□ -0.55
NFKB1-202ENST00000394820 C19orf12Q9NSK7 152 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 ASPMQ8IZT6 3477 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 CEBPZOSA8MTT3 80 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 TIAF1O95411 115 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 B4GALT1P15291 398 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 RPUSD4Q96CM3 377 aaKnown RBP11.64□□□□□ -0.55
NFKB1-202ENST00000394820 NIPSNAP3BQ9BS92 247 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 LPAR5Q9H1C0 372 aa11.64□□□□□ -0.55
NFKB1-202ENST00000394820 CYTIPO60759 359 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 BPNT1O95861 308 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 CXCL12P48061 93 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 P2RY4P51582 365 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 DVL1P1P54792 670 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-202ENST00000394820 OR5AS1Q8N127 324 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 PLK3Q9H4B4 646 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 MMACHCQ9Y4U1 282 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF816-ZNF321PA0A0X1KG74 233 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 M0R135 149 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 CD79AP11912 226 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 NKAIN1Q4KMZ8 207 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 PLAC9Q5JTB6 97 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 OR1N1Q8NGS0 311 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 EMG1Q92979 244 aaKnown RBP11.63□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF799Q96GE5 643 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 WFIKKN1Q96NZ8 548 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 SEC11CQ9BY50 192 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 GFOD1Q9NXC2 390 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 TIMM8BQ9Y5J9 83 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-202ENST00000394820 THADAQ6YHU6 1953 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 CADP27708 2225 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 IGLV1-36A0A0B4J1U3 117 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF705FA8MVS1 300 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-202ENST00000394820 CST4P01036 141 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF705DP0CH99 300 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF705BP0CI00 300 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-202ENST00000394820 RAB5AP20339 215 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 NKX2-1P43699 371 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-202ENST00000394820 MALLQ13021 153 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 CMTM1Q8IZ96 169 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 SLC43A2Q8N370 569 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 ADIPOR1Q96A54 375 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 PHYHIPLQ96FC7 376 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 SSX3Q99909 188 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 RNF126Q9BV68 326 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 METTL9Q9H1A3 318 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 P4HTMQ9NXG6 502 aa11.63□□□□□ -0.55
NFKB1-202ENST00000394820 RCC2Q9P258 522 aaKnown RBP11.63□□□□□ -0.55
NFKB1-202ENST00000394820 C9JQL5 133 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 MSTNO14793 375 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 CLPSP04118 112 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 S100GP29377 79 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 PIGYQ3MUY2 71 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 SLC25A26Q70HW3 274 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms