RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SLC35B3Q9H1N7 401 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 BCO1Q9HAY6 547 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 MTCH2Q9Y6C9 303 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 ADAMTS20P59510 1910 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 M0R036 132 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 SCRG1O75711 98 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 EIF3GO75821 320 aaKnown RBP eCLIP8.78□□□□□ -16e-9■■■■□ 22.8
UBE2D3-208ENST00000394803 OR2J2O76002 312 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 GLAP06280 429 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 OR8U9P0C7N5 309 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 ZNF806P0C7X5 589 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 SFTPDP35247 375 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 HERV-K104P61576 105 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 ENDOGQ14249 297 aaKnown RBP8.78□□□□□ -1
UBE2D3-208ENST00000394803 TMEM187Q14656 261 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 AWAT1Q58HT5 328 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 C6orf201Q7Z4U5 140 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 MAML2Q8IZL2 1156 aaPredicted RBP8.78□□□□□ -1
UBE2D3-208ENST00000394803 OR8U1Q8NH10 309 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 NPRL2Q8WTW4 380 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 SECTM1Q8WVN6 248 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 RTN4IP1Q8WWV3 396 aaPredicted RBP8.78□□□□□ -1
UBE2D3-208ENST00000394803 WDR77Q9BQA1 342 aaPredicted RBP8.78□□□□□ -1
UBE2D3-208ENST00000394803 SOX7Q9BT81 388 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 DUSP15Q9H1R2 295 aaPredicted RBP8.78□□□□□ -1
UBE2D3-208ENST00000394803 FAM86C1Q9NVL1 165 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 PLEK2Q9NYT0 353 aa8.78□□□□□ -1
UBE2D3-208ENST00000394803 NXT1Q9UKK6 140 aaKnown RBP8.78□□□□□ -1
UBE2D3-208ENST00000394803 MCTS1Q9ULC4 181 aaKnown RBP8.78□□□□□ -1
UBE2D3-208ENST00000394803 PTRH2Q9Y3E5 179 aaKnown RBP8.78□□□□□ -1
UBE2D3-208ENST00000394803 PCDH15Q96QU1 1955 aa8.77□□□□□ -1
UBE2D3-208ENST00000394803 C7orf77A4D0Y5 90 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 HSPA12AO43301 675 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 CDS2O95674 445 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 IFNA17P01571 189 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 MBPP02686 304 aaPredicted RBP8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 LTBRP36941 435 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 RBP2P50120 134 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 AFF3P51826 1226 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 RAB2AP61019 212 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 SNRPEP62304 92 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 MRPS34P82930 218 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 H3F3AP84243 136 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 C1QL2Q7Z5L3 287 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM219AQ8IW50 185 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 ZFP82Q8N141 532 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 MAFIPQ8WZ33 124 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 PIGTQ969N2 578 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 BORCS8Q96FH0 119 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 LIN37Q96GY3 246 aaPredicted RBP8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 CLCC1Q96S66 551 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 SLC25A31Q9H0C2 315 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 SPACA1Q9HBV2 294 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 IL36GQ9NZH8 169 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 NSG1A0A0A6YYJ2 146 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 DUXBA0A1W2PPF3 345 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 SGCEO43556 437 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 SNRNP70P08621 437 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 ZNF44P15621 663 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 DSCR4P56555 118 aaPredicted RBP8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 SPEM2Q0P670 501 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM27BQ5VT28 67 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 RALGAPA1Q6GYQ0 2036 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 LCN10Q6JVE6 187 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 ASCL4Q6XD76 172 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 C1QL4Q86Z23 238 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 C18orf12Q96KH6 178 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 RASL10BQ96S79 203 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 SF3B5Q9BWJ5 86 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 SMIM3Q9BZL3 60 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 ULBP2Q9BZM5 246 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 SLC7A11Q9UPY5 501 aa8.77□□□□□ -1.01
UBE2D3-208ENST00000394803 OR5AC1P0C628 307 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 RAB5AP20339 215 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 MALLQ13021 153 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 CLINT1Q14677 625 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 AKIRIN2Q53H80 203 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 CRIP3Q6Q6R5 217 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 ZNF100Q8IYN0 542 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 LRRC18Q8N456 261 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 TOMM40LQ969M1 308 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 NABP1Q96AH0 204 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 MOB3AQ96BX8 217 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 OR6C1Q96RD1 312 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 DUSP23Q9BVJ7 150 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 RBM24Q9BX46 236 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 WDR54Q9H977 334 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 SLC2A9Q9NRM0 540 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 AK3Q9UIJ7 227 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 CST2P09228 141 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 MMP9P14780 707 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 S100PP25815 95 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 MAS1LP35410 378 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 TMEM211Q6ICI0 200 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 LURAP1LQ8IV03 231 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 TMEM123Q8N131 208 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 OSR2Q8N2R0 312 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 GPR137CQ8N3F9 429 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 WDSUB1Q8N9V3 476 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 MARS2Q96GW9 593 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms