RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
LCA5-202ENST00000392959 CRHP06850 196 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 CTGFP29279 349 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 ETFDHQ16134 617 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 NPEPL1Q8NDH3 523 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 TRAPPC1Q9Y5R8 145 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 TRIP11Q15643 1979 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 TMEM218A2RU14 115 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 TMEM267Q0VDI3 215 aaPredicted RBP11.67□□□□□ -0.54
LCA5-202ENST00000392959 RGS7BPQ6MZT1 257 aaPredicted RBP11.67□□□□□ -0.54
LCA5-202ENST00000392959 BVESQ8NE79 360 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 PLPPR2Q96GM1 343 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 ACY3Q96HD9 319 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 BARX1Q9HBU1 254 aaPredicted RBP11.67□□□□□ -0.54
LCA5-202ENST00000392959 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 TRGV10A0A0A0MS01 117 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
LCA5-202ENST00000392959 C2CD4DB7Z1M9 353 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 CYC1P08574 325 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 F2RP25116 425 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 PSG6Q00889 435 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 IFITM3Q01628 133 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 WFDC8Q8IUA0 241 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 OIT3Q8WWZ8 545 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 FAM210BQ96KR6 192 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 RPP25Q9BUL9 199 aaKnown RBP11.67□□□□□ -0.54
LCA5-202ENST00000392959 PCED1AQ9H1Q7 454 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 KCNK15Q9H427 330 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 FRRS1LQ9P0K9 344 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 POMT1Q9Y6A1 747 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 IGHV1OR21-1A0A087WYE8 117 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 OR4C45A6NMZ5 311 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 HOXC4P09017 264 aaPredicted RBP11.67□□□□□ -0.54
LCA5-202ENST00000392959 MMP7P09237 267 aaPredicted RBP11.67□□□□□ -0.54
LCA5-202ENST00000392959 IQCJQ1A5X6 159 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 FFAR4Q5NUL3 377 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 C16orf47Q6ZP98 133 aaPredicted RBP11.67□□□□□ -0.54
LCA5-202ENST00000392959 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.67□□□□□ -0.54
LCA5-202ENST00000392959 LSMEM1Q8N8F7 131 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 TAAR3PQ9P1P4 343 aa11.67□□□□□ -0.54
LCA5-202ENST00000392959 TCRBV16S1A1N1A0A5B0 115 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 NTN1O95631 604 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 CD200P41217 278 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 PABPC1L2AQ5JQF8 200 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 TDHQ8IZJ6 230 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 OR11H7Q8NGC8 314 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 KISS1RQ969F8 398 aaPredicted RBP11.66□□□□□ -0.54
LCA5-202ENST00000392959 CACNG5Q9UF02 275 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 DOCK2Q92608 1830 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 CEACAM6P40199 344 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 GZMMP51124 257 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 FZD5Q13467 585 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 SURF2Q15527 256 aaPredicted RBP11.66□□□□□ -0.54
LCA5-202ENST00000392959 C1QL3Q5VWW1 255 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 OR5M9Q8NGP3 310 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 NRTNQ99748 197 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 ZPBPQ9BS86 351 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 ADAT1Q9BUB4 502 aaKnown RBP11.66□□□□□ -0.54
LCA5-202ENST00000392959 SVILO95425 2214 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 OR5H15A6NDH6 313 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 HEXAP06865 529 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 LPAR6P43657 344 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 HNRNPA3P51991 378 aaKnown RBP11.66□□□□□ -0.54
LCA5-202ENST00000392959 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
LCA5-202ENST00000392959 FAM3AP98173 230 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 LGALSLQ3ZCW2 172 aaPredicted RBP11.66□□□□□ -0.54
LCA5-202ENST00000392959 C9orf50Q5SZB4 431 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 TMEM91Q6ZNR0 172 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 RFESDQ8TAC1 157 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 VAMP8Q9BV40 100 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 HES4Q9HCC6 221 aa11.66□□□□□ -0.54
LCA5-202ENST00000392959 TNFSF15O95150 251 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 LY86O95711 162 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 CTSDP07339 412 aaPredicted RBP11.65□□□□□ -0.54
LCA5-202ENST00000392959 PPP1CAP62136 330 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 CD226Q15762 336 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 MESTQ5EB52 335 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 NEU3Q9UQ49 428 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 YTHDF2Q9Y5A9 579 aaKnown RBP11.65□□□□□ -0.54
LCA5-202ENST00000392959 CLEC18BQ6UXF7 455 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 ATG4DQ86TL0 474 aaPredicted RBP11.65□□□□□ -0.54
LCA5-202ENST00000392959 OR10V1Q8NGI7 309 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 OR10AC1Q8NH08 325 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 M1APQ8TC57 530 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 TMEM230Q96A57 120 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 VSTM2LQ96N03 204 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 WDR13Q9H1Z4 485 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 LSM2Q9Y333 95 aaKnown RBP11.65□□□□□ -0.54
LCA5-202ENST00000392959 J3QR89 54 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 ISXQ2M1V0 245 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 HLA-BQ31612 363 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 STPG2Q8N412 459 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 ANXA10Q9UJ72 324 aa11.65□□□□□ -0.54
LCA5-202ENST00000392959 PMCHP20382 165 aa11.65□□□□□ -0.55
LCA5-202ENST00000392959 PAX5Q02548 391 aa11.65□□□□□ -0.55
LCA5-202ENST00000392959 ANKRD37Q7Z713 158 aa11.65□□□□□ -0.55
LCA5-202ENST00000392959 TRAF4Q9BUZ4 470 aaPredicted RBP11.65□□□□□ -0.55
LCA5-202ENST00000392959 CA6P23280 308 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 GALR1P47211 349 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms