RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 RBM11P57052 281 aaKnown RBP21.65■■□□□ 1.06
SHOX2-201ENST00000389589 FAHD2BQ6P2I3 314 aaPredicted RBP21.65■■□□□ 1.06
SHOX2-201ENST00000389589 SPACA3Q8IXA5 215 aa21.65■■□□□ 1.06
SHOX2-201ENST00000389589 MKXQ8IYA7 352 aa21.65■■□□□ 1.06
SHOX2-201ENST00000389589 OR5P3Q8WZ94 311 aa21.65■■□□□ 1.06
SHOX2-201ENST00000389589 STARD4Q96DR4 205 aa21.65■■□□□ 1.06
SHOX2-201ENST00000389589 FAHD2AQ96GK7 314 aa21.65■■□□□ 1.06
SHOX2-201ENST00000389589 OR2A7Q96R45 310 aa21.65■■□□□ 1.06
SHOX2-201ENST00000389589 FGF23Q9GZV9 251 aaPredicted RBP21.65■■□□□ 1.06
SHOX2-201ENST00000389589 OR51B6Q9H340 312 aa21.65■■□□□ 1.06
SHOX2-201ENST00000389589 SLA2Q9H6Q3 261 aa21.65■■□□□ 1.06
SHOX2-201ENST00000389589 EDARQ9UNE0 448 aa21.65■■□□□ 1.06
SHOX2-201ENST00000389589 OR5B21A6NL26 309 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 OR2AT4A6NND4 320 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 GEMIN2O14893 280 aaKnown RBP21.64■■□□□ 1.05
SHOX2-201ENST00000389589 SMPD2O60906 423 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 CGAP01215 116 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 DNASE1P24855 282 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 HAAOP46952 286 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 RAP2BP61225 183 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 P2RY6Q15077 328 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 PIGYQ3MUY2 71 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 ELP2Q6IA86 826 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 MYPOPQ86VE0 399 aaPredicted RBP21.64■■□□□ 1.05
SHOX2-201ENST00000389589 ASCC1Q8N9N2 400 aaKnown RBP21.64■■□□□ 1.05
SHOX2-201ENST00000389589 OR2T35Q8NGX2 323 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 CYYR1Q96J86 154 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 OBP2BQ9NPH6 170 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 CA10Q9NS85 328 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 MGAT4AQ9UM21 535 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A10PA6NDY2 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A18PA6NE21 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A16PA6NEW6 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A20PA6NIJ5 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A8PA6NJQ4 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A7PA6NKC0 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A22PA8MWA6 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A12PA8MX19 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A5PA8MXJ8 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A23PA8MXZ1 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 PRSS44E7EML9 344 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 GFRA3O60609 400 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A15PP0C7V4 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A13PP0C7W8 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A14PP0C7W9 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAM90A24PP0C7X0 464 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 TSPAN5P62079 268 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 PPP1CBP62140 327 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 SEM1Q6ZVN7 128 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 BHLHE23Q8NDY6 225 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 OR5AP2Q8NGF4 316 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 FAAP24Q9BTP7 215 aa21.64■■□□□ 1.05
SHOX2-201ENST00000389589 ZNF629Q9UEG4 869 aaPredicted RBP21.64■■□□□ 1.05
SHOX2-201ENST00000389589 DTYMKP23919 212 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 IL32P24001 234 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 PMELP40967 661 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 MPPED2Q15777 294 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 CHRFAM7AQ494W8 412 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 LAMTOR1Q6IAA8 161 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 FAM180AQ6UWF9 173 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 BEND4Q6ZU67 534 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 C12orf45Q8N5I9 185 aaPredicted RBP21.63■■□□□ 1.05
SHOX2-201ENST00000389589 ZNF610Q8N9Z0 462 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 WDR31Q8NA23 367 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 OR10AD1Q8NGE0 317 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 SCGB3A2Q96PL1 93 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 GON7Q9BXV9 100 aa21.63■■□□□ 1.05
SHOX2-201ENST00000389589 ZNF701Q9NV72 531 aaPredicted RBP21.63■■□□□ 1.05
SHOX2-201ENST00000389589 ZNF230Q9UIE0 474 aaPredicted RBP21.63■■□□□ 1.05
SHOX2-201ENST00000389589 PDCD6O75340 191 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 IGKV3-15P01624 115 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 GSTT2P0CG29 244 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 TSC22D1Q15714 1073 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 C1orf185Q5T7R7 199 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 OR2T2Q6IF00 324 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 C9orf62Q8N4C0 152 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 ASB13Q8WXK3 278 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 CHIAQ9BZP6 476 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 PIPOXQ9P0Z9 390 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 AK3Q9UIJ7 227 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 NOP16Q9Y3C1 178 aaKnown RBP21.62■■□□□ 1.05
SHOX2-201ENST00000389589 HSPB11Q9Y547 144 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 CEACAM18A8MTB9 384 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 TAS2R31P59538 309 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 GNG3P63215 75 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 NCCRP1Q6ZVX7 275 aaPredicted RBP21.62■■□□□ 1.05
SHOX2-201ENST00000389589 CXorf67Q86X51 503 aaPredicted RBP21.62■■□□□ 1.05
SHOX2-201ENST00000389589 ABHD17AQ96GS6 310 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 CMSS1Q9BQ75 279 aaKnown RBP21.62■■□□□ 1.05
SHOX2-201ENST00000389589 ZNF71Q9NQZ8 489 aaPredicted RBP21.62■■□□□ 1.05
SHOX2-201ENST00000389589 WASF3Q9UPY6 502 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 CFAP47Q6ZTR5 3102 aa21.62■■□□□ 1.05
SHOX2-201ENST00000389589 DHRS2Q13268 280 aa21.61■■□□□ 1.05
SHOX2-201ENST00000389589 NHLRC3Q5JS37 347 aa21.61■■□□□ 1.05
SHOX2-201ENST00000389589 ZNF573Q86YE8 665 aa21.61■■□□□ 1.05
SHOX2-201ENST00000389589 UXS1Q8NBZ7 420 aa21.61■■□□□ 1.05
SHOX2-201ENST00000389589 SLAMF9Q96A28 289 aa21.61■■□□□ 1.05
SHOX2-201ENST00000389589 SULT4A1Q9BR01 284 aa21.61■■□□□ 1.05
SHOX2-201ENST00000389589 OPN3Q9H1Y3 402 aaPredicted RBP21.61■■□□□ 1.05
SHOX2-201ENST00000389589 PPA2Q9H2U2 334 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms