RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 HES4Q9HCC6 221 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 GSTK1Q9Y2Q3 226 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 TRAV38-1A0A0B4J264 116 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 IGHV4-61A0A0C4DH41 118 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 LOC100506127A0A0U1RQW1 187 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 RNF223E7ERA6 249 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 CYB5AP00167 134 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 MUC1P15941 1255 aaPredicted RBP12.95□□□□□ -0.34
PDGFB-202ENST00000381551 USF1P22415 310 aaPredicted RBP12.95□□□□□ -0.34
PDGFB-202ENST00000381551 CD80P33681 288 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 RPL5P46777 297 aaKnown RBP12.95□□□□□ -0.34
PDGFB-202ENST00000381551 NPBWR2P48146 333 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 GMFBP60983 142 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 TIMM50Q3ZCQ8 353 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 ZNF404Q494X3 552 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 TMEM155Q4W5P6 130 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 JAGN1Q8N5M9 183 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 PXT1Q8NFP0 134 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 TNFAIP8L1Q8WVP5 186 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 SLAMF9Q96A28 289 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 FOXRED1Q96CU9 486 aaPredicted RBP12.95□□□□□ -0.34
PDGFB-202ENST00000381551 CEP19Q96LK0 163 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 GFI1Q99684 422 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 TMEM246Q9BRR3 403 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 UQCC2Q9BRT2 126 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 CNTD2Q9H8S5 307 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 SCOCQ9UIL1 159 aa12.95□□□□□ -0.34
PDGFB-202ENST00000381551 AK6Q9Y3D8 172 aaKnown RBP12.95□□□□□ -0.34
PDGFB-202ENST00000381551 ZNF469Q96JG9 3925 aaPredicted RBP12.94□□□□□ -0.34
PDGFB-202ENST00000381551 IGHV3OR15-7A0A075B7D8 119 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 ISPDA4D126 451 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 AIREO43918 545 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 KDM4BO94953 1096 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 BCL3P20749 454 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 OR3A4PP47883 348 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 LOXL1Q08397 574 aaPredicted RBP12.94□□□□□ -0.34
PDGFB-202ENST00000381551 MICBQ29980 383 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 C1orf100Q5SVJ3 147 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 GLT8D1Q68CQ7 371 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 ACP7Q6ZNF0 438 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 FAM90A1Q86YD7 464 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 BATF2Q8N1L9 274 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 MUC20Q8N307 709 aaPredicted RBP12.94□□□□□ -0.34
PDGFB-202ENST00000381551 CIARTQ8N365 385 aaPredicted RBP12.94□□□□□ -0.34
PDGFB-202ENST00000381551 PNLDC1Q8NA58 520 aaKnown RBP12.94□□□□□ -0.34
PDGFB-202ENST00000381551 C12orf43Q96C57 262 aaKnown RBP12.94□□□□□ -0.34
PDGFB-202ENST00000381551 KCTD7Q96MP8 289 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 RNF167Q9H6Y7 350 aa12.94□□□□□ -0.34
PDGFB-202ENST00000381551 TRAPPC2LH3BP13 241 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 NDUFA2O43678 99 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 NXPH2O95156 264 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 CDRT1O95170 752 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 SFTPBP07988 381 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 PSMD7P51665 324 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 LMO4P61968 165 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 KCNJ8Q15842 424 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 ATPAF1Q5TC12 328 aaPredicted RBP12.93□□□□□ -0.34
PDGFB-202ENST00000381551 GPR141Q7Z602 305 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 Q8IYB0 196 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 SPICQ8N5J4 248 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 Q8NFD4 153 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 OR5T2Q8NGG2 359 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 OR4D6Q8NGJ1 314 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 CLDND2Q8NHS1 167 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 NARFLQ9H6Q4 476 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 RHOFQ9HBH0 211 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 SMURF1Q9HCE7 757 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 RBFOX1Q9NWB1 397 aaKnown RBP12.93□□□□□ -0.34
PDGFB-202ENST00000381551 NLKQ9UBE8 527 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 ING4Q9UNL4 249 aa12.93□□□□□ -0.34
PDGFB-202ENST00000381551 OR2AT4A6NND4 320 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 CEACAM18A8MTB9 384 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 H7C1Q1 480 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 PDCD5O14737 125 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 GYPAP02724 150 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 WNT2P09544 360 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 PSG2P11465 335 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 AMY2BP19961 511 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 MYL9P24844 172 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 MTNR1BP49286 362 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 SMIM21Q3B7S5 101 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 ELP2Q6IA86 826 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 FAM166AQ6J272 317 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 GLIPR1L1Q6UWM5 242 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 LYPD2Q6UXB3 125 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 DCDC5Q6ZRR9 648 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 TPRA1Q86W33 373 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 ANKRD13BQ86YJ7 626 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 FAM58AQ8N1B3 248 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 MAPK1IP1LQ8NDC0 245 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 ANGPTL6Q8NI99 470 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 C1orf147Q96MC9 270 aaPredicted RBP12.92□□□□□ -0.34
PDGFB-202ENST00000381551 GAL3ST1Q99999 423 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 FAM192AQ9GZU8 254 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 PATZ1Q9HBE1 687 aaKnown RBP12.92□□□□□ -0.34
PDGFB-202ENST00000381551 HMG20AQ9NP66 347 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 DNAJB11Q9UBS4 358 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 MRPS28Q9Y2Q9 187 aaKnown RBP12.92□□□□□ -0.34
PDGFB-202ENST00000381551 V9GY05 133 aa12.92□□□□□ -0.34
PDGFB-202ENST00000381551 IGKV1D-17A0A075B6S4 117 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms