RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 TMEM133Q9H2Q1 129 aa13.7□□□□□ -0.22
HMGN1-203ENST00000380748 J3QT63 122 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 DNAJC8O75937 253 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-203ENST00000380748 SLC6A1P30531 599 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 BRS3P32247 399 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 MAP2K3P46734 347 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 NUDT2P50583 147 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 GP2P55259 537 aaKnown RBP13.69□□□□□ -0.22
HMGN1-203ENST00000380748 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-203ENST00000380748 KCTD14Q9BQ13 255 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-203ENST00000380748 MED20Q9H944 212 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 HES4Q9HCC6 221 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 ZFP57Q9NU63 452 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 DCAF13Q9NV06 445 aaKnown RBP13.69□□□□□ -0.22
HMGN1-203ENST00000380748 MRGBPQ9NV56 204 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 SLC22A13Q9Y226 551 aa13.69□□□□□ -0.22
HMGN1-203ENST00000380748 CCL24O00175 119 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 NOS1APO75052 506 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-203ENST00000380748 ZNF737O75373 536 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 MMP23AO75900 390 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 GSTT1P30711 240 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 HAAOP46952 286 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 BLVRAP53004 296 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 PSMA6P60900 246 aaKnown RBP13.68□□□□□ -0.22
HMGN1-203ENST00000380748 EDDM3AQ14507 147 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 C9orf66Q5T8R8 295 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 RPL13AP3Q6NVV1 102 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 PLBD1Q6P4A8 553 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 BAIAP2L2Q6UXY1 529 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 GDPD3Q7L5L3 318 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 KRT77Q7Z794 578 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 ZNF695Q8IW36 515 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 OR4Q3Q8NH05 313 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 ATP6V1G3Q96LB4 118 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 IL20Q9NYY1 176 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 DPM3Q9P2X0 92 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 SCOCQ9UIL1 159 aa13.68□□□□□ -0.22
HMGN1-203ENST00000380748 SAMD4AQ9UPU9 718 aaKnown RBP13.68□□□□□ -0.22
HMGN1-203ENST00000380748 SEMG1P04279 462 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 RRM2P31350 389 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 SNAPC1Q16533 368 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 DEFB136Q30KP8 78 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 C8orf82Q6P1X6 216 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-203ENST00000380748 SHFQ7M4L6 423 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 TPRX1Q8N7U7 411 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 OR9Q2Q8NGE9 314 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 TSSK6Q9BXA6 273 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 NIPAL2Q9H841 368 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 LINC00527Q9UJ94 153 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 HHLA2Q9UM44 414 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 ZNF256Q9Y2P7 627 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-203ENST00000380748 SMAD5-AS1Q9Y6J3 95 aa13.67□□□□□ -0.22
HMGN1-203ENST00000380748 MEF2CQ06413 473 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-203ENST00000380748 GLYATQ6IB77 296 aa13.66□□□□□ -0.22
HMGN1-203ENST00000380748 ZBTB49Q6ZSB9 765 aa13.66□□□□□ -0.22
HMGN1-203ENST00000380748 TRPM8Q7Z2W7 1104 aa13.66□□□□□ -0.22
HMGN1-203ENST00000380748 OR8H2Q8N162 312 aa13.66□□□□□ -0.22
HMGN1-203ENST00000380748 OR5M8Q8NGP6 311 aa13.66□□□□□ -0.22
HMGN1-203ENST00000380748 CDRT15Q96T59 188 aa13.66□□□□□ -0.22
HMGN1-203ENST00000380748 BTBD10Q9BSF8 475 aa13.66□□□□□ -0.22
HMGN1-203ENST00000380748 TAS2R1Q9NYW7 299 aa13.66□□□□□ -0.22
HMGN1-203ENST00000380748 NKX1-2Q9UD57 310 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-203ENST00000380748 POLDIP2Q9Y2S7 368 aa13.66□□□□□ -0.22
HMGN1-203ENST00000380748 hADV38S2A0JD32 116 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 FAM183AA6NL82 134 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 SEC14L6B5MCN3 397 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 M0QZK8 103 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 LYNP07948 512 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 OVCH2Q7RTZ1 564 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 COMMD2Q86X83 199 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 ZNF573Q86YE8 665 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 EGFL6Q8IUX8 553 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 CHPT1Q8WUD6 406 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 THEM6Q8WUY1 208 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 CITED4Q96RK1 184 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 HOPXQ9BPY8 73 aaPredicted RBP13.65□□□□□ -0.22
HMGN1-203ENST00000380748 PAPOLBQ9NRJ5 636 aaKnown RBP13.65□□□□□ -0.22
HMGN1-203ENST00000380748 ARMC1Q9NVT9 282 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 PIGLQ9Y2B2 252 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 KLHDC2Q9Y2U9 406 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 MOB4Q9Y3A3 225 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 LINC00312Q9Y6C7 94 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 HSPE1-MOB4S4R3N1 261 aa13.65□□□□□ -0.22
HMGN1-203ENST00000380748 TMEM82A0PJX8 343 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 FAM172BPA6NC97 362 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 LY86O95711 162 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 NRASP01111 189 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 ARHGDIBP52566 201 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 ERVK11-1P61568 191 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 BDH1Q02338 343 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 RIPPLY1Q0D2K3 151 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 ZNF684Q5T5D7 378 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 RASSF6Q6ZTQ3 369 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 ABHD12Q8N2K0 398 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 OTOSQ8NHW6 89 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 LYVE1Q9Y5Y7 322 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 PCLOQ9Y6V0 5065 aa13.64□□□□□ -0.23
HMGN1-203ENST00000380748 PLECQ15149 4684 aaKnown RBP13.64□□□□□ -0.23
HMGN1-203ENST00000380748 SORL1Q92673 2214 aa13.63□□□□□ -0.23
HMGN1-203ENST00000380748 A0A0U1RQV5 110 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms