RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 CDK5Q00535 292 aa18.65■□□□□ 0.58
U2AF1-202ENST00000380276 SNAPC1Q16533 368 aa18.65■□□□□ 0.58
U2AF1-202ENST00000380276 KRT74Q7RTS7 529 aa18.65■□□□□ 0.58
U2AF1-202ENST00000380276 ZNF679Q8IYX0 411 aa18.65■□□□□ 0.58
U2AF1-202ENST00000380276 HS3ST5Q8IZT8 346 aa18.65■□□□□ 0.58
U2AF1-202ENST00000380276 ITFG2Q969R8 447 aa18.65■□□□□ 0.58
U2AF1-202ENST00000380276 OR8B4Q96RC9 309 aa18.65■□□□□ 0.58
U2AF1-202ENST00000380276 TVP23BQ9NYZ1 205 aa18.65■□□□□ 0.58
U2AF1-202ENST00000380276 NUFIP1Q9UHK0 495 aaKnown RBP18.65■□□□□ 0.58
U2AF1-202ENST00000380276 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.65■□□□□ 0.58
U2AF1-202ENST00000380276 COPS3Q9UNS2 423 aa18.65■□□□□ 0.58
U2AF1-202ENST00000380276 A6NIN4 97 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 FAM90A8PA6NJQ4 464 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 VGLL3A8MV65 326 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 LOC110117498-PIK3R3F6TDL0 507 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 F2RL2O00254 374 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 ZNF254O75437 659 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 CD33P20138 364 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 VDAC2P45880 294 aaPredicted RBP18.64■□□□□ 0.57
U2AF1-202ENST00000380276 OR12D2P58182 307 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 CBX1P83916 185 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 COL10A1Q03692 680 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 CALHM1Q8IU99 346 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 Q8N2B8 174 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 TRMT10AQ8TBZ6 339 aaKnown RBP18.64■□□□□ 0.57
U2AF1-202ENST00000380276 ASB17Q8WXJ9 295 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 MALSU1Q96EH3 234 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 NSL1Q96IY1 281 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 NRIP2Q9BQI9 281 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 SLC22A13Q9Y226 551 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 TMEM14AQ9Y6G1 99 aa18.64■□□□□ 0.57
U2AF1-202ENST00000380276 C17orf98A8MV24 154 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 PRR32B1ATL7 298 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 INMTO95050 263 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 IGLV3-1P01715 115 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 TTRP02766 147 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 PRKACGP22612 351 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 TMEM95Q3KNT9 176 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 BCL2L15Q5TBC7 163 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 GDPD3Q7L5L3 318 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 ANGPTL5Q86XS5 388 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 HILPDAQ9Y5L2 63 aa18.63■□□□□ 0.57
U2AF1-202ENST00000380276 PQLC2LA1A4F0 135 aa18.62■□□□□ 0.57
U2AF1-202ENST00000380276 NOS1APO75052 506 aaPredicted RBP18.62■□□□□ 0.57
U2AF1-202ENST00000380276 ZNF728P0DKX0 622 aa18.62■□□□□ 0.57
U2AF1-202ENST00000380276 GYS2P54840 703 aa18.62■□□□□ 0.57
U2AF1-202ENST00000380276 SLC34A1Q06495 639 aa18.62■□□□□ 0.57
U2AF1-202ENST00000380276 EDDM3AQ14507 147 aa18.62■□□□□ 0.57
U2AF1-202ENST00000380276 FOXB2Q5VYV0 432 aa18.62■□□□□ 0.57
U2AF1-202ENST00000380276 ADGRG5Q8IZF4 528 aa18.62■□□□□ 0.57
U2AF1-202ENST00000380276 NDNFQ8TB73 568 aa18.62■□□□□ 0.57
U2AF1-202ENST00000380276 ASB9Q96DX5 294 aa18.62■□□□□ 0.57
U2AF1-202ENST00000380276 FAM230AA0A1W2PPH8 454 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 CCDC182A6NF36 153 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 ODF3BA8MYP8 253 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 DLGAP1O14490 977 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 MPIG6BO95866 241 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 ALDOBP05062 364 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 PF4V1P10720 104 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 IGLL1P15814 213 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 JUNBP17275 347 aaPredicted RBP18.61■□□□□ 0.57
U2AF1-202ENST00000380276 DLX6P56179 175 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 ROM1Q03395 351 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 ZNF626Q68DY1 528 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 PLEKHG7Q6ZR37 379 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 Q6ZS46 218 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 PIGWQ7Z7B1 504 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 CNN2Q99439 309 aaKnown RBP18.61■□□□□ 0.57
U2AF1-202ENST00000380276 APOL4Q9BPW4 351 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 MOB1AQ9H8S9 216 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 SLC25A19Q9HC21 320 aa18.61■□□□□ 0.57
U2AF1-202ENST00000380276 ADARB2-AS1A8MUL3 147 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 K7N7A8 449 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 MAGEB4O15481 346 aaPredicted RBP18.6■□□□□ 0.57
U2AF1-202ENST00000380276 CHRM2P08172 466 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 IGHV1-8P0DP01 117 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 ANXA8P13928 327 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 BLCAPP62952 87 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 CANT1Q8WVQ1 401 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 ZNF714Q96N38 554 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 HES4Q9HCC6 221 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 OR52A1Q9UKL2 312 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 V9GYS6 101 aa18.6■□□□□ 0.57
U2AF1-202ENST00000380276 H3BSH0 61 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 CXCR4P61073 352 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 ACTR3P61158 418 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 ACTA2P62736 377 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 ACTG2P63267 376 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 ACTC1P68032 377 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 ACTA1P68133 377 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 ODF4Q2M2E3 257 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 LDLRAD2Q5SZI1 272 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 ZNF322Q6U7Q0 402 aaPredicted RBP18.59■□□□□ 0.57
U2AF1-202ENST00000380276 ZNF676Q8N7Q3 588 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 OR11H6Q8NGC7 330 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 WNT10AQ9GZT5 417 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 PLEKHA1Q9HB21 404 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 SLC7A11Q9UPY5 501 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 R4GMQ9 66 aa18.59■□□□□ 0.57
U2AF1-202ENST00000380276 H3BUI4 141 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms