RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 SGCEO43556 437 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 ACTL6AO96019 429 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 CSTBP04080 98 aaKnown RBP8.3□□□□□ -1.08
TRIM39-202ENST00000376659 AKR1C4P17516 323 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 DTYMKP23919 212 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 NUP62P37198 522 aaPredicted RBP8.3□□□□□ -1.08
TRIM39-202ENST00000376659 RBM39Q14498 530 aaKnown RBP8.3□□□□□ -1.08
TRIM39-202ENST00000376659 PAN3Q58A45 887 aaKnown RBP8.3□□□□□ -1.08
TRIM39-202ENST00000376659 PLA2G2CQ5R387 149 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 SKA3Q8IX90 412 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 NANPQ8TBE9 248 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 C18orf12Q96KH6 178 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 DDA1Q9BW61 102 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 LINC00470Q9BZP3 86 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 PRDM14Q9GZV8 571 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 TRBV23-1A0A0A0MS06 115 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 IGHEP01854 428 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 FCGR2AP12318 317 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 TAS2R46P59540 309 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 RAB14P61106 215 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF92Q03936 586 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 PDSS1Q5T2R2 415 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 LDLRAD3Q86YD5 345 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 BPIFCQ8NFQ6 507 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 OR10AD1Q8NGE0 317 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 OR51T1Q8NGJ9 327 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 OR10D3Q8NH80 312 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 PIGTQ969N2 578 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 SMIM8Q96KF7 97 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 ULBP2Q9BZM5 246 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 AMDHD2Q9Y303 409 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 PRSS47A8MTI9 375 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 NPIPA2E9PIF3 369 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 NPIPA3F8WFD2 350 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 CTSDP07339 412 aaPredicted RBP8.29□□□□□ -1.08
TRIM39-202ENST00000376659 HKR1P10072 659 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF32P17041 273 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 SNTB1Q13884 538 aaKnown RBP8.29□□□□□ -1.08
TRIM39-202ENST00000376659 GPR173Q9NS66 373 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 PQLC2LA1A4F0 135 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 F5H5K5 113 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 GATCO43716 136 aaKnown RBP8.29□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF806P0C7X5 589 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 PI3P19957 117 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 SERPINA2P20848 420 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 BEX5Q5H9J7 111 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 C11orf88Q6PI97 169 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 YRDCQ86U90 279 aaKnown RBP8.29□□□□□ -1.08
TRIM39-202ENST00000376659 C1orf210Q8IVY1 113 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 SEMA6DQ8NFY4 1073 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 OR2V1Q8NHB1 315 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF845Q96IR2 970 aaPredicted RBP8.29□□□□□ -1.08
TRIM39-202ENST00000376659 FOXJ2Q9P0K8 574 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 RCC2Q9P258 522 aaKnown RBP8.29□□□□□ -1.08
TRIM39-202ENST00000376659 ANXA10Q9UJ72 324 aa8.29□□□□□ -1.08
TRIM39-202ENST00000376659 SDCBPO00560 298 aaPredicted RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 SFTPBP07988 381 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 CPT2P23786 658 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 BLVRBP30043 206 aaPredicted RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 UCP2P55851 309 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 FLI1Q01543 452 aaPredicted RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 TMEM187Q14656 261 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 SSPNQ14714 243 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 SRSF7Q16629 238 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 UQCC3Q6UW78 93 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 ODF3L1Q8IXM7 274 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 OR1S2Q8NGQ3 325 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 OR5H2Q8NGV7 314 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 NPRL2Q8WTW4 380 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 GALNT14Q96FL9 552 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 SIGLEC12Q96PQ1 595 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 ALKBH3Q96Q83 286 aaPredicted RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 URM1Q9BTM9 101 aaKnown RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF391Q9UJN7 358 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 POLR1DQ9Y2S0 133 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 GJE1A6NN92 205 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 TLX3O43711 291 aaPredicted RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 DEDDO75618 318 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 CELA3AP09093 270 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 B4GALT1P15291 398 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 TAF13Q15543 124 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 PIGYQ3MUY2 71 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 ACER2Q5QJU3 275 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 CALHM1Q8IU99 346 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 FAM219AQ8IW50 185 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 DYRK2Q92630 601 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 HS3ST6Q96QI5 342 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 SMOC1Q9H4F8 434 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 PCDHB10Q9UN67 800 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 CARHSP1Q9Y2V2 147 aaKnown RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 MAP1BP46821 2468 aaKnown RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 SPRY1O43609 319 aaPredicted RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 CFIP05156 583 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 SERPINA7P05543 415 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 KLK3P07288 261 aaPredicted RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 PATE4P0C8F1 98 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 LRRC37A5PQ49AS3 106 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 ANKRD39Q53RE8 183 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 PLXDC2Q6UX71 529 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 ABHD3Q8WU67 409 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms