RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SH2D2AQ9NP31 389 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 NAGKQ9UJ70 344 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 ZNF32P17041 273 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 CSF2RBP32927 897 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 EIF4E3Q8N5X7 224 aaKnown RBP10.28□□□□□ -0.76
VCL-202ENST00000372755 VSTM2AQ8TAG5 236 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 CLEC5AQ9NY25 188 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 SCN11AQ9UI33 1791 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 SBK3P0C264 359 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 ASCL1P50553 236 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 C20orf196Q8IYI0 205 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 OR52L2PQ8NGH6 319 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 TSPAN32Q96QS1 320 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 AMDHD2Q9Y303 409 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 OR2W5A6NFC9 320 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 FXYD1O00168 92 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 RER1O15258 196 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 COX7A1P24310 79 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 SRD5A2P31213 254 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 FMODQ06828 376 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 SPNS3Q6ZMD2 512 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 FAAP24Q9BTP7 215 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 GLRX2Q9NS18 164 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 MTFP1Q9UDX5 166 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 H3BMH7 237 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 BMPR1BO00238 502 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 FCN1O00602 326 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 CIDEAO60543 219 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 TMEM215Q68D42 235 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 GUSBP11Q6P575 273 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 OR10D3Q8NH80 312 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 OIT3Q8WWZ8 545 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 TMEM37Q8WXS4 190 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 ZMAT5Q9UDW3 170 aaKnown RBP10.27□□□□□ -0.76
VCL-202ENST00000372755 CACNG5Q9UF02 275 aa10.27□□□□□ -0.76
VCL-202ENST00000372755 RGPD5Q99666 1765 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 KIAA1324LA8MWY0 1029 aaPredicted RBP10.27□□□□□ -0.77
VCL-202ENST00000372755 RD3LP0DJH9 198 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 FZD5Q13467 585 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 DGAT2L7PQ6IED9 249 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 VWA1Q6PCB0 445 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 SEC11CQ9BY50 192 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 GSX1Q9H4S2 264 aaPredicted RBP10.27□□□□□ -0.77
VCL-202ENST00000372755 FZR1Q9UM11 496 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 MPC1Q9Y5U8 109 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 CITO14578 2027 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 A0A1B0GTQ1 180 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 RAG2P55895 527 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 WDR31Q8NA23 367 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 SLC35B3Q9H1N7 401 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 WNT16Q9UBV4 365 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 C9orf170A2RU37 121 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 PTHLHP12272 177 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
VCL-202ENST00000372755 HLXQ14774 488 aaPredicted RBP10.27□□□□□ -0.77
VCL-202ENST00000372755 PDCD1Q15116 288 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 CEBPEQ15744 281 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 Q6ZS52 159 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 SLC26A10Q8NG04 563 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 OR10G4Q8NGN3 311 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 OR10G9Q8NGN4 311 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 OR10G7Q8NGN6 311 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 LILRB1Q8NHL6 650 aaPredicted RBP10.27□□□□□ -0.77
VCL-202ENST00000372755 GNRHR2Q96P88 292 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 A0A1W2PR80 420 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 HOXC4P09017 264 aaPredicted RBP10.27□□□□□ -0.77
VCL-202ENST00000372755 MPLP40238 635 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 LYZP61626 148 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 TGIF2LXQ8IUE1 241 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 OR4S2Q8NH73 311 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 RFESDQ8TAC1 157 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 UBALD1Q8TB05 177 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 MRGPRX3Q96LB0 322 aa10.27□□□□□ -0.77
VCL-202ENST00000372755 CTAG2O75638 210 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 FAM87AP0C7U9 286 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 BRS3P32247 399 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 LGALS7P47929 136 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 PPP1R1AQ13522 171 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 GGNBP1Q5YKI7 109 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 LIAT1Q6ZQX7 453 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 DOLPP1Q86YN1 238 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 TMEM167BQ9NRX6 74 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 SLC7A10Q9NS82 523 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 ZNF275Q9NSD4 429 aaPredicted RBP10.26□□□□□ -0.77
VCL-202ENST00000372755 NPTNQ9Y639 398 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 SPNP16150 400 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 RAE1P78406 368 aaKnown RBP10.26□□□□□ -0.77
VCL-202ENST00000372755 LSM11P83369 360 aaKnown RBP eCLIP10.26□□□□□ -0.77
VCL-202ENST00000372755 PRICKLE4Q2TBC4 344 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 CA10Q9NS85 328 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 TMEM30AQ9NV96 361 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 TMIGD3P0DMS9 266 aaPredicted RBP10.26□□□□□ -0.77
VCL-202ENST00000372755 C6orf201Q7Z4U5 140 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 C20orf141Q9NUB4 165 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 TRAV38-1A0A0B4J264 116 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 A0A1W2PNV4 684 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 INHBBP09529 407 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 RPL30P62888 115 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms