RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 NDUFAF3Q9BU61 184 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 CLEC18AA5D8T8 446 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 SPRY1O43609 319 aaPredicted RBP11.34□□□□□ -0.59
GPC4-201ENST00000370828 SLC25A6P12236 298 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 TNFSF4P23510 183 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 FCER1GP30273 86 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 MDH2P40926 338 aaKnown RBP11.34□□□□□ -0.59
GPC4-201ENST00000370828 CLN3Q13286 438 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 MPV17LQ2QL34 196 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 TSPO2Q5TGU0 170 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 TSEN54Q7Z6J9 526 aaKnown RBP11.34□□□□□ -0.59
GPC4-201ENST00000370828 CLEC18CQ8NCF0 446 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 CPEB3Q8NE35 698 aaKnown RBP11.34□□□□□ -0.59
GPC4-201ENST00000370828 ZCCHC14Q8WYQ9 949 aaKnown RBP11.34□□□□□ -0.59
GPC4-201ENST00000370828 FAM173AQ9BQD7 235 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 NAT8BQ9UHF3 227 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 ICOSLGO75144 302 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 AMTP48728 403 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 CSNK1EP49674 416 aaKnown RBP11.34□□□□□ -0.59
GPC4-201ENST00000370828 CD200R1LQ6Q8B3 271 aa11.34□□□□□ -0.59
GPC4-201ENST00000370828 ZNF48Q96MX3 618 aaPredicted RBP11.34□□□□□ -0.59
GPC4-201ENST00000370828 CITED2Q99967 270 aaPredicted RBP11.34□□□□□ -0.59
GPC4-201ENST00000370828 A0A1B0GWJ7 208 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ADAM20O43506 726 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ZNF737O75373 536 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ZNF17P17021 662 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ERVFC1-1P60608 527 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 TBX15Q96SF7 602 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ST3GAL6Q9Y274 331 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 LTBP3Q9NS15 1303 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 M0R135 149 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 FCN1O00602 326 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ZNF749O43361 778 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 C1QL1O75973 258 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ABHD16AO95870 558 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 OR5G3P0C626 314 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 RPS4XP62701 263 aaKnown RBP11.33□□□□□ -0.6
GPC4-201ENST00000370828 PNRC1Q12796 327 aaPredicted RBP11.33□□□□□ -0.6
GPC4-201ENST00000370828 OR13G1Q8NGZ3 307 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 OR4C3Q8NH37 302 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ZNF799Q96GE5 643 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ATP5SQ99766 215 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 LAT2Q9GZY6 243 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 Q9N2K0 584 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 MMP25Q9NPA2 562 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 RCC2Q9P258 522 aaKnown RBP11.33□□□□□ -0.6
GPC4-201ENST00000370828 B4GALT7Q9UBV7 327 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ST6GALNAC2Q9UJ37 374 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 A0A1W2PNR3 127 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 DLEU1O43261 78 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 TCTN1Q2MV58 587 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 STUMQ69YW2 141 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 DHRS7BQ6IAN0 325 aaPredicted RBP11.33□□□□□ -0.6
GPC4-201ENST00000370828 C6orf201Q7Z4U5 140 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 TMED3Q9Y3Q3 217 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 SHISA3A0PJX4 238 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ZFAND5O76080 213 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 ID4P47928 161 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 EMP1P54849 157 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 FMODQ06828 376 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 RFLNBQ8N5W9 214 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 PPP1R35Q8TAP8 253 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 PATE1Q8WXA2 126 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 MRGPRX4Q96LA9 322 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 NRTNQ99748 197 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 OBP2BQ9NPH6 170 aa11.33□□□□□ -0.6
GPC4-201ENST00000370828 DOCK2Q92608 1830 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 IGHV3-20A0A0C4DH32 117 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 K7EQM0 130 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 DEDDO75618 318 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 PIAS2O75928 621 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 TCTAP57738 103 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 NUTF2P61970 127 aaKnown RBP11.32□□□□□ -0.6
GPC4-201ENST00000370828 DEFB103AP81534 67 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 NAAAQ02083 359 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 MRPL24Q96A35 216 aaKnown RBP11.32□□□□□ -0.6
GPC4-201ENST00000370828 ZNF707Q96C28 371 aaPredicted RBP11.32□□□□□ -0.6
GPC4-201ENST00000370828 RSG1Q9BU20 258 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 OR5AC2Q9NZP5 309 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 TCN2P20062 427 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 GAMTQ14353 236 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 IL13RA2Q14627 380 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 CA13Q8N1Q1 262 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 C11orf40Q8WZ69 217 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 SOX7Q9BT81 388 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 SLC25A22Q9H936 323 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 A0A1B0GW15 77 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 CTXN2P0C2S0 81 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 MMP9P14780 707 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 NIT1Q86X76 327 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 C19orf43Q9BQ61 176 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 PRSS50Q9UI38 385 aa11.32□□□□□ -0.6
GPC4-201ENST00000370828 MRPS17Q9Y2R5 130 aaKnown RBP11.32□□□□□ -0.6
GPC4-201ENST00000370828 HOXB3P14651 431 aaPredicted RBP11.31□□□□□ -0.6
GPC4-201ENST00000370828 CDAP32320 146 aa11.31□□□□□ -0.6
GPC4-201ENST00000370828 TSPAN7P41732 249 aa11.31□□□□□ -0.6
GPC4-201ENST00000370828 OR3A4PP47883 348 aa11.31□□□□□ -0.6
GPC4-201ENST00000370828 ATP5IP56385 69 aaPredicted RBP11.31□□□□□ -0.6
GPC4-201ENST00000370828 VN1R17PQ8TDU5 208 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms