RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 NPDC1Q9NQX5 325 aaPredicted RBP20.31■□□□□ 0.84
SNX3-203ENST00000368979 NKIRAS2Q9NYR9 191 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 KALRNO60229 2985 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 ZSCAN5BA6NJL1 495 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 SULT1C2O00338 296 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 AKR7A2O43488 359 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 ORC5O43913 435 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 PTTG1O95997 202 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 MELTFP08582 738 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 PRSS3P35030 304 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 PLAC9Q5JTB6 97 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 ZNF57Q68EA5 555 aaPredicted RBP20.3■□□□□ 0.84
SNX3-203ENST00000368979 Q6ZTK2 550 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 RTN4RL2Q86UN3 420 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 MINDY2Q8NBR6 621 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 SCCPDHQ8NBX0 429 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 CHST4Q8NCG5 386 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 GPX8Q8TED1 209 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 GTF3AQ92664 365 aaKnown RBP20.3■□□□□ 0.84
SNX3-203ENST00000368979 RAB3CQ96E17 227 aa20.3■□□□□ 0.84
SNX3-203ENST00000368979 ZMAT3Q9HA38 289 aaKnown RBP20.3■□□□□ 0.84
SNX3-203ENST00000368979 HCFC1P51610 2035 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 LINC00854A0A1B0GVQ3 168 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 TMEM235A6NFC5 223 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 F5H5P2 479 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 C1QL1O75973 258 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 HIST1H1DP16402 221 aaKnown RBP20.29■□□□□ 0.84
SNX3-203ENST00000368979 SELENOVP59797 346 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 GUCA2AQ02747 115 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 MAB21L1Q13394 359 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 ADIPOQQ15848 244 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 CDNFQ49AH0 187 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 DCDC5Q6ZRR9 648 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 FBXL14Q8N1E6 418 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 TLNRD1Q9H1K6 362 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 SCPEP1Q9HB40 452 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 TAAR3PQ9P1P4 343 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 KLK11Q9UBX7 282 aa20.29■□□□□ 0.84
SNX3-203ENST00000368979 ELF5Q9UKW6 265 aaPredicted RBP20.29■□□□□ 0.84
SNX3-203ENST00000368979 TRAPPC2LH3BP13 241 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 H7C417 338 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 MFNGO00587 321 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 RHBDL1O75783 438 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 CD3EP07766 207 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 GSTP1P09211 210 aaKnown RBP20.28■□□□□ 0.84
SNX3-203ENST00000368979 GNB3P16520 340 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 RBM11P57052 281 aaKnown RBP20.28■□□□□ 0.84
SNX3-203ENST00000368979 FGF12P61328 243 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 PIGYQ3MUY2 71 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 BEX5Q5H9J7 111 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 SEH1LQ96EE3 360 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 POM121Q96HA1 1249 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 C11orf54Q9H0W9 315 aaPredicted RBP20.28■□□□□ 0.84
SNX3-203ENST00000368979 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.28■□□□□ 0.84
SNX3-203ENST00000368979 RBFOX1Q9NWB1 397 aaKnown RBP20.28■□□□□ 0.84
SNX3-203ENST00000368979 MTFP1Q9UDX5 166 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 POU2F3Q9UKI9 436 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 KCNK7Q9Y2U2 307 aa20.28■□□□□ 0.84
SNX3-203ENST00000368979 F8VVB4 439 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 F8VWA3 439 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 SIAH2O43255 324 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 GABRR1P24046 479 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 BLVRBP30043 206 aaPredicted RBP20.27■□□□□ 0.84
SNX3-203ENST00000368979 CD200P41217 278 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 SRP9P49458 86 aaKnown RBP20.27■□□□□ 0.84
SNX3-203ENST00000368979 MZT1Q08AG7 82 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 KLF9Q13886 244 aaPredicted RBP20.27■□□□□ 0.84
SNX3-203ENST00000368979 TRIM16LQ309B1 348 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 NHLRC3Q5JS37 347 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 BATF2Q8N1L9 274 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 TOMM5Q8N4H5 51 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 ARHGAP5-AS1Q96IT6 56 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 RHOFQ9HBH0 211 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 ST3GAL6Q9Y274 331 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 POLDIP2Q9Y2S7 368 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 BAHCC1Q9P281 2608 aa20.27■□□□□ 0.84
SNX3-203ENST00000368979 PLSCR5A0PG75 271 aa20.27■□□□□ 0.83
SNX3-203ENST00000368979 LPLP06858 475 aa20.27■□□□□ 0.83
SNX3-203ENST00000368979 GRPP07492 148 aa20.27■□□□□ 0.83
SNX3-203ENST00000368979 DAZAP2Q15038 168 aaPredicted RBP20.27■□□□□ 0.83
SNX3-203ENST00000368979 TAF9Q16594 264 aa20.27■□□□□ 0.83
SNX3-203ENST00000368979 SIGIRRQ6IA17 410 aa20.27■□□□□ 0.83
SNX3-203ENST00000368979 GDPD3Q7L5L3 318 aa20.27■□□□□ 0.83
SNX3-203ENST00000368979 C11orf53Q8IXP5 236 aa20.27■□□□□ 0.83
SNX3-203ENST00000368979 OR2Z1Q8NG97 314 aa20.27■□□□□ 0.83
SNX3-203ENST00000368979 CDIPTO14735 213 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 GEMIN2O14893 280 aaKnown RBP20.26■□□□□ 0.83
SNX3-203ENST00000368979 LYRM1O43325 122 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 SSX4O60224 188 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 PTBP3O95758 552 aaKnown RBP20.26■□□□□ 0.83
SNX3-203ENST00000368979 OR4A8P0C604 315 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 RFX2P48378 723 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 SSBP1Q04837 148 aaKnown RBP20.26■□□□□ 0.83
SNX3-203ENST00000368979 Q6ZNX1 250 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 ZNF488Q96MN9 340 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 HS3ST6Q96QI5 342 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 PECRQ9BY49 303 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 PLK3Q9H4B4 646 aa20.26■□□□□ 0.83
SNX3-203ENST00000368979 NBASA2RRP1 2371 aa20.25■□□□□ 0.83
SNX3-203ENST00000368979 A0A1B0GVG6 124 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms