RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SPCS3P61009 180 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 KHDC3LQ587J8 217 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 C11orf87Q6NUJ2 197 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 CORO6Q6QEF8 472 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 DEFB108BQ8NET1 73 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 C2CD4DB7Z1M9 353 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 TMPRSS11DO60235 418 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 HSBP1O75506 76 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 SLC25A5P05141 298 aaKnown RBP8.67□□□□□ -1.02
CUX1-203ENST00000360264 DGCR2P98153 550 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 ACSM6Q6P461 480 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 GPR119Q8TDV5 335 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 NPTNQ9Y639 398 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 TRBV5-4A0A0C4DH59 114 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 TMEM272A0A1B0GTI8 110 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 ST6GAL1P15907 406 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 HTR1DP28221 377 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 RXFP4Q8TDU9 374 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 HLA-BQ31612 363 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 FUNDC1Q8IVP5 155 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 TMEM116Q8NCL8 245 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 AKR7LQ8NHP1 331 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 MARCH1Q8TCQ1 289 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 RPL34P49207 117 aaKnown RBP8.67□□□□□ -1.02
CUX1-203ENST00000360264 TRIP6Q15654 476 aaKnown RBP8.67□□□□□ -1.02
CUX1-203ENST00000360264 ACER2Q5QJU3 275 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 GNRHR2Q96P88 292 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 SPACA5Q96QH8 159 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 DOCK4Q8N1I0 1966 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 SPRY1O43609 319 aaPredicted RBP8.67□□□□□ -1.02
CUX1-203ENST00000360264 TM4SF19Q96DZ7 209 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 PTDSS2Q9BVG9 487 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 HCSTQ9UBK5 93 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 TCRBV5S1A1TA0A578 114 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 POM121BA6NF01 834 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 DUSP18Q8NEJ0 188 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 UBALD1Q8TB05 177 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 CD37P11049 281 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 SNRPNP63162 240 aaKnown RBP8.67□□□□□ -1.02
CUX1-203ENST00000360264 FABP5Q01469 135 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 TMPRSS11FQ6ZWK6 438 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 OR8B3Q8NGG8 313 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 OR8B2Q96RD0 313 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 LRP12Q9Y561 859 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 FAHD2BQ6P2I3 314 aaPredicted RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 CELF2-AS1Q8N7Q2 184 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 FAHD2AQ96GK7 314 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 PHOX2AO14813 284 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 PARP12Q9H0J9 701 aaKnown RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 SLC26A1Q9H2B4 701 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 NAGKQ9UJ70 344 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 KTI12Q96EK9 354 aaPredicted RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 TCFL5Q9UL49 500 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 OOEPA6NGQ2 149 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 PPP2CBP62714 309 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 PPP2CAP67775 309 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 BCDIN3DQ7Z5W3 292 aaKnown RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 C1orf210Q8IVY1 113 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 GABRG3Q99928 467 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 VAMP8Q9BV40 100 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 TOLLIPQ9H0E2 274 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 COA4Q9NYJ1 87 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 UFC1Q9Y3C8 167 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 KISS1Q15726 138 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 SPATA46Q5T0L3 261 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 LRRC61Q9BV99 259 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 CXXC4Q9H2H0 198 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 H0Y8X5 98 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 CXCL10P02778 98 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 PTGFRP43088 359 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 OR3A4PP47883 348 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 PHYHIPLQ96FC7 376 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 P4HTMQ9NXG6 502 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 ZNF629Q9UEG4 869 aaPredicted RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 BCORQ6W2J9 1755 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 SPRY3O43610 288 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 TNFAIP6P98066 277 aaPredicted RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 RHOUQ7L0Q8 258 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 VN1R1Q9GZP7 353 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 CYR61O00622 381 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 HIST1H1DP16402 221 aaKnown RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 MBNL1Q9NR56 388 aaKnown RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 GPNMBQ14956 572 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 PDPNQ86YL7 162 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 LILRB1Q8NHL6 650 aaPredicted RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 FAAP24Q9BTP7 215 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 ZNF426Q9BUY5 554 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 NAT8BQ9UHF3 227 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 ZNF737O75373 536 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 SURF2Q15527 256 aaPredicted RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 CCDC144NLQ6NUI1 221 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 SSX7Q7RTT5 188 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 ZMAT5Q9UDW3 170 aaKnown RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 ZNF230Q9UIE0 474 aaPredicted RBP8.66□□□□□ -1.02
CUX1-203ENST00000360264 TRAPPC1Q9Y5R8 145 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 FAHP16930 419 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 CD200P41217 278 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 PAFAH1B2P68402 229 aa8.66□□□□□ -1.02
CUX1-203ENST00000360264 WDR74Q6RFH5 385 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms