RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 LYRM1O43325 122 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 SYNGR1O43759 233 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 PTHLHP12272 177 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 MGMTP16455 207 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 PRSS3P35030 304 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 GDNFP39905 211 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 RSU1Q15404 277 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 MZT2BQ6NZ67 158 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 HAGHLQ6PII5 290 aaPredicted RBP15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 NRARPQ7Z6K4 114 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 ZNF573Q86YE8 665 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 OR56B1Q8NGI3 324 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 OR10R2Q8NGX6 335 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 AQP3Q92482 292 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 NICN1Q9BSH3 213 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 SCPEP1Q9HB40 452 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 RBFOX1Q9NWB1 397 aaKnown RBP15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 POU2F3Q9UKI9 436 aa15.42■□□□□ 0.06
SMARCD3-202ENST00000356800 IGHV3-64DA0A0J9YX35 117 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 MEIOCA2RUB1 952 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 WIPF3A6NGB9 483 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 H7C417 338 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 SFTPBP07988 381 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 MELTFP08582 738 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 OR4A8P0C604 315 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 MPZP25189 248 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 NPBWR2P48146 333 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 VEGFCP49767 419 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 MAB21L1Q13394 359 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 DYRK1AQ13627 763 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 KLF9Q13886 244 aaPredicted RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 ZNF260Q3ZCT1 412 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 RNASE12Q5GAN4 147 aaKnown RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 SAXO1Q8IYX7 474 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 LILRB1Q8NHL6 650 aaPredicted RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 SLAMF9Q96A28 289 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 MRPS24Q96EL2 167 aaKnown RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 CXXC4Q9H2H0 198 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 PCDHB16Q9NRJ7 776 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 MTCH1Q9NZJ7 389 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 KLK11Q9UBX7 282 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 MTFP1Q9UDX5 166 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 RNF115Q9Y4L5 304 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 USP9XQ93008 2570 aaPredicted RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 LRP5LA4QPB2 252 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 HTR3BO95264 441 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 ECDO95905 644 aaPredicted RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 CSTBP04080 98 aaKnown RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 GTF2F2P13984 249 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 IGFBP2P18065 325 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 KIR2DL3P43628 341 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 AP3S2P59780 193 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 SSBP1Q04837 148 aaKnown RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 ZNF154Q13106 437 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 CCBE1Q6UXH8 406 aaPredicted RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 RTN4RL2Q86UN3 420 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 TMEM200AQ86VY9 491 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 BATF2Q8N1L9 274 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 SCCPDHQ8NBX0 429 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 Q8NFD4 153 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 GPX8Q8TED1 209 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 PIK3IP1Q96FE7 263 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 C7orf50Q9BRJ6 194 aaKnown RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 TMEM204Q9BSN7 226 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 PKIBQ9C010 78 aa15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 UBR5O95071 2799 aaPredicted RBP15.41■□□□□ 0.06
SMARCD3-202ENST00000356800 FAM208BQ5VWN6 2430 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 MYO18BQ8IUG5 2567 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 FOXI3A8MTJ6 420 aaPredicted RBP15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 F8VVB4 439 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 F8VWA3 439 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 J3QT63 122 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 SSX4O60224 188 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 RHBDL1O75783 438 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 LPLP06858 475 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 GSTT2BP0CG30 244 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 SPNP16150 400 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 BCL3P20749 454 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 CPT2P23786 658 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 SRP9P49458 86 aaKnown RBP15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 SELENOVP59797 346 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 OR2Z1Q8NG97 314 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 OR51T1Q8NGJ9 327 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 DEDD2Q8WXF8 326 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 SEH1LQ96EE3 360 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 POM121Q96HA1 1249 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 CYYR1Q96J86 154 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 Q96M66 194 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 SELENOIQ9C0D9 397 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 PLK3Q9H4B4 646 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 CACNG2Q9Y698 323 aa15.4■□□□□ 0.06
SMARCD3-202ENST00000356800 ABCA4P78363 2273 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 ANKRD20A5PA0PJZ0 165 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 TMEM210A6NLX4 147 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 AKR7A2O43488 359 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 RBBP9O75884 186 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 GRPP07492 148 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 IL24Q13007 206 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 CDNFQ49AH0 187 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms