RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 RAC3P60763 192 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 PAX5Q02548 391 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 LIMS2Q7Z4I7 341 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 NUBPLQ8TB37 319 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 EID2BQ96D98 161 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 CXorf58Q96LI9 332 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 RASL10BQ96S79 203 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 CLEC5AQ9NY25 188 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 A0A1B0GTH9 108 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 FAM157AC9JC47 383 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 WDR74Q6RFH5 385 aaPredicted RBP16.02■□□□□ 0.15
COL18A1-202ENST00000355480 NEIL1Q96FI4 390 aaPredicted RBP16.02■□□□□ 0.15
COL18A1-202ENST00000355480 GRAMD2BQ96HH9 432 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 HSD17B10Q99714 261 aaKnown RBP16.02■□□□□ 0.15
COL18A1-202ENST00000355480 MAGEA5P43359 124 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 TMED3Q9Y3Q3 217 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 A0A1W2PN81 502 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 ACSM4P0C7M7 580 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 CTLA4P16410 223 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 CHRNA7P36544 502 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 FFAR4Q5NUL3 377 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 NHLRC2Q8NBF2 726 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 CYSLTR2Q9NS75 346 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 BRWD1Q9NSI6 2320 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 PDCD6O75340 191 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 KIR2DS2P43631 304 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 ZNF528Q3MIS6 628 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 MOGAT1Q96PD6 335 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 TMEM208Q9BTX3 173 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 C12orf10Q9HB07 376 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 SLC2A8Q9NY64 477 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 FKBP11Q9NYL4 201 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 PLPP2O43688 288 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 C11orf87Q6NUJ2 197 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 MSRB3Q8IXL7 192 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 ZDHHC22Q8N966 263 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 TMPRSS5Q9H3S3 457 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 ZNF275Q9NSD4 429 aaPredicted RBP16.01■□□□□ 0.15
COL18A1-202ENST00000355480 THYN1Q9P016 225 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 TGOLN2O43493 480 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 OR3A1P47881 315 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 WDR61Q9GZS3 305 aaKnown RBP16.01■□□□□ 0.15
COL18A1-202ENST00000355480 UBTD1Q9HAC8 227 aa16.01■□□□□ 0.15
COL18A1-202ENST00000355480 YTHDF2Q9Y5A9 579 aaKnown RBP16.01■□□□□ 0.15
COL18A1-202ENST00000355480 OR2M5A3KFT3 312 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 OR5B21A6NL26 309 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 AKR7A2O43488 359 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 GP1BAP07359 652 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 OR4A8P0C604 315 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 CPN1P15169 458 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 PRSS12P56730 875 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 SKP2Q13309 424 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 GLDNQ6ZMI3 551 aaPredicted RBP16■□□□□ 0.15
COL18A1-202ENST00000355480 SLC25A5P05141 298 aaKnown RBP16■□□□□ 0.15
COL18A1-202ENST00000355480 SLC38A11Q08AI6 406 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 ZIC1Q15915 447 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 DPF1Q92782 380 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 AKIP1Q9NQ31 210 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 OR6C3Q9NZP0 311 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 TRAV38-1A0A0B4J264 116 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 C3orf85A0A1B0GTC6 90 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 SPAARA0A1B0GVQ0 90 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 PGA3P0DJD8 388 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 RHOBP62745 196 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 SPINK9Q5DT21 86 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 DHRS7BQ6IAN0 325 aaPredicted RBP16■□□□□ 0.15
COL18A1-202ENST00000355480 OR2M7Q8NG81 312 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 OR1L4Q8NGR5 311 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 OR6X1Q8NH79 312 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 RASL12Q9NYN1 266 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 SCN9AQ15858 1988 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 RTP5Q14D33 572 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 NIT2Q9NQR4 276 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 INSL4Q14641 139 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 TUSC5Q8IXB3 177 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 CRISPLD2Q9H0B8 497 aa16■□□□□ 0.15
COL18A1-202ENST00000355480 A0A1B0GTQ1 180 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 LOC102723971A0A1B0GUV8 181 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 TMPRSS2O15393 492 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 OPN1MWP04001 364 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 OPN1MW2P0DN77 364 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 OPN1MW3P0DN78 364 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 CD96P40200 585 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 CDC20Q12834 499 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 FNDC7Q5VTL7 733 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 OCEL1Q9H607 264 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 ZNF260Q3ZCT1 412 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 HMGCLL1Q8TB92 370 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 MPC1Q9Y5U8 109 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 SCN7AQ01118 1682 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 C21orf140B9A014 251 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 F5H697 171 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 ANKRD34CP0C6C1 535 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 PTTG1IPP53801 180 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 PJVKQ0ZLH3 352 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 TREM2Q9NZC2 230 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 EXOGQ9Y2C4 368 aaKnown RBP15.99■□□□□ 0.15
COL18A1-202ENST00000355480 THSD4Q6ZMP0 1018 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 ASB10Q8WXI3 467 aa15.99■□□□□ 0.15
COL18A1-202ENST00000355480 RAB40CQ96S21 281 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms