RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SEMG2Q02383 582 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 AESQ08117 197 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 OR10G8Q8NGN5 311 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 SMOC1Q9H4F8 434 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 GLIPR2Q9H4G4 154 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 CALHM2Q9HA72 323 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 MED13Q9UHV7 2174 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 A0A1B0GTL3 188 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 FCER1GP30273 86 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 SLC6A12P48065 614 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 TAS2R45P59539 299 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 SNAI3Q3KNW1 292 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 CHST14Q8NCH0 376 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 ZNF480Q8WV37 535 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 ARRDC3Q96B67 414 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 IGSF21Q96ID5 467 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 MAGT1Q9H0U3 335 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 PIPOXQ9P0Z9 390 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 TMED7Q9Y3B3 224 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 PLXND1Q9Y4D7 1925 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 ARFGEF1Q9Y6D6 1849 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 IGKV6-21A0A0C4DH24 114 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 VSTM2BA6NLU5 285 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 NPIPB8E9PQR5 432 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 NPIPB7O75200 414 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 ZFPL1O95159 310 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 HNRNPA1P09651 372 aaKnown RBP eCLIP4.52□□□□□ -1.69
SKP1-202ENST00000353411 C1SP09871 688 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 SELPP16109 830 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 GPM6AP51674 278 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 SELENOVP59797 346 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 LDLRAD1Q5T700 205 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 S100A7AQ86SG5 101 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 LSRQ86X29 649 aaPredicted RBP4.52□□□□□ -1.69
SKP1-202ENST00000353411 C17orf47Q8NEP4 570 aa4.52□□□□□ -1.69
SKP1-202ENST00000353411 MBNL1Q9NR56 388 aaKnown RBP4.52□□□□□ -1.69
SKP1-202ENST00000353411 LOC107986453A0A1B0GWG9 222 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 CLEC18AA5D8T8 446 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 PITX3O75364 302 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 CYC1P08574 325 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 PI3P19957 117 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 RPS23P62266 143 aaKnown RBP4.51□□□□□ -1.69
SKP1-202ENST00000353411 AMER3Q8N944 861 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 ZNF784Q8NCA9 323 aaPredicted RBP4.51□□□□□ -1.69
SKP1-202ENST00000353411 CLEC18CQ8NCF0 446 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 TM4SF18Q96CE8 201 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 ZG16BQ96DA0 208 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 SLC6A18Q96N87 628 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 IP6K3Q96PC2 410 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 DERL1Q9BUN8 251 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 ABCA7Q8IZY2 2146 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 FGF16O43320 207 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 CSNK1DP48730 415 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 VGLL4Q14135 290 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 Q6ZVL8 140 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 ARL14EPQ8N8R7 260 aaPredicted RBP4.51□□□□□ -1.69
SKP1-202ENST00000353411 OR10W1Q8NGF6 305 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 OR9A4Q8NGU2 314 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 BOD1Q96IK1 185 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 SPSB2Q99619 263 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 GINS3Q9BRX5 216 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 GPR84Q9NQS5 396 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 TRAPPC2LQ9UL33 140 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 PRSS21Q9Y6M0 314 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 BRCA1P38398 1863 aaKnown RBP4.51□□□□□ -1.69
SKP1-202ENST00000353411 A0A1B0GWA3 101 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 BLACEA4D250 179 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 SNAI1O95863 264 aaPredicted RBP4.51□□□□□ -1.69
SKP1-202ENST00000353411 ZNF17P17021 662 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 OTX2P32243 289 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 RPL34P49207 117 aaKnown RBP4.51□□□□□ -1.69
SKP1-202ENST00000353411 TCL1AP56279 114 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 TIAL1Q01085 375 aaKnown RBP eCLIP4.51□□□□□ -1.692e-6■■■■□ 22.9
SKP1-202ENST00000353411 ZNF880Q6PDB4 577 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 HTR3DQ70Z44 454 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 OR4D9Q8NGE8 314 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 ZNF48Q96MX3 618 aaPredicted RBP4.51□□□□□ -1.69
SKP1-202ENST00000353411 SIGLEC11Q96RL6 698 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 SOSTQ9BQB4 213 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 PECRQ9BY49 303 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 CHST6Q9GZX3 395 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 FZD1Q9UP38 647 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 EOMESO95936 686 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 LBX1P52954 281 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 MLF1P58340 268 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 KIAA0040Q15053 153 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 TMEM255AQ5JRV8 349 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 PTX4Q96A99 478 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 ADAT3Q96EY9 351 aaPredicted RBP4.51□□□□□ -1.69
SKP1-202ENST00000353411 UBTD1Q9HAC8 227 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 PSENENQ9NZ42 101 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 MTCH1Q9NZJ7 389 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 IGKV6D-21A0A0A0MT36 114 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 ADM5C9JUS6 153 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 COCHO43405 550 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 TGM5O43548 720 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 NUDT3O95989 172 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 IGHEP01854 428 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 SOD2P04179 222 aa4.51□□□□□ -1.69
SKP1-202ENST00000353411 LCATP04180 440 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms