RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ARHGAP5-AS1Q96IT6 56 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 SLC35E1Q96K37 410 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 GSX1Q9H4S2 264 aaPredicted RBP11.64□□□□□ -0.55
IFT88-202ENST00000351808 GPR35Q9HC97 309 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 AURKAIP1Q9NWT8 199 aaPredicted RBP11.64□□□□□ -0.55
IFT88-202ENST00000351808 LAMA3Q16787 3333 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 FAM24AA6NFZ4 105 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 TNFSF13O75888 250 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 NDUFB8O95169 186 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 H2BFMP0C1H6 154 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 EWSR1Q01844 656 aaKnown RBP eCLIP11.64□□□□□ -0.55
IFT88-202ENST00000351808 RUNX2Q13950 521 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 C16orf82Q7Z2V1 217 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 LYZL2Q7Z4W2 148 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 SULF2Q8IWU5 870 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 C20orf144Q9BQM9 153 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 LOC102723971A0A1B0GUV8 181 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 ZFP92A6NM28 416 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 TMEM14DPA8MWL7 114 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 CEBPBP17676 345 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 ENDOGQ14249 297 aaKnown RBP11.63□□□□□ -0.55
IFT88-202ENST00000351808 MMDQ15546 238 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 TMEM215Q68D42 235 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 KCTD18Q6PI47 426 aaPredicted RBP11.63□□□□□ -0.55
IFT88-202ENST00000351808 TMEM256Q8N2U0 113 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 SLC22A24Q8N4F4 322 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 OR14L1PQ8NHC6 308 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 PYGO2Q9BRQ0 406 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 ALKBH7Q9BT30 221 aaPredicted RBP11.63□□□□□ -0.55
IFT88-202ENST00000351808 GPR84Q9NQS5 396 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 ZNF581Q9P0T4 197 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 CHTOPQ9Y3Y2 248 aaKnown RBP11.63□□□□□ -0.55
IFT88-202ENST00000351808 K7EP13 123 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 LATO43561 262 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 NUPR1O60356 82 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 TRAPPC6AO75865 159 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 TDGF1P13385 188 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 GALNSP34059 522 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 RUNX1Q01196 453 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 MLF2Q15773 248 aaPredicted RBP11.63□□□□□ -0.55
IFT88-202ENST00000351808 CST9LP1Q5W188 147 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 CACUL1Q86Y37 369 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 FBXL14Q8N1E6 418 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 OR5L2Q8NGL0 311 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 C8orf44Q96CB5 159 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 RBMXL1Q96E39 390 aaKnown RBP11.63□□□□□ -0.55
IFT88-202ENST00000351808 LMF2Q9BU23 707 aaKnown RBP11.63□□□□□ -0.55
IFT88-202ENST00000351808 CTDSP1Q9GZU7 261 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.63□□□□□ -0.55
IFT88-202ENST00000351808 KIAA2026Q5HYC2 2103 aa11.63□□□□□ -0.55
IFT88-202ENST00000351808 LRRK1Q38SD2 2015 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 HSD11B1P28845 292 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 ROM1Q03395 351 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 FBXW12Q6X9E4 464 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 CMTM1Q8IZ96 169 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 STPG4Q8N801 248 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 OR10S1Q8NGN2 331 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 ZCCHC14Q8WYQ9 949 aaKnown RBP11.62□□□□□ -0.55
IFT88-202ENST00000351808 C11orf98E9PRG8 122 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 SPINT1O43278 529 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 CBR3O75828 277 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 CSTAP01040 98 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 RAC2P15153 192 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 RAB28P51157 221 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 HIST1H3AP68431 136 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 ADIRFQ15847 76 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 ATP6V1FQ16864 119 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 GLIPR1L1Q6UWM5 242 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 Q6ZVH6 145 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 ADAT3Q96EY9 351 aaPredicted RBP11.62□□□□□ -0.55
IFT88-202ENST00000351808 MMP25Q9NPA2 562 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 G6PC2Q9NQR9 355 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 SCN10AQ9Y5Y9 1956 aa11.62□□□□□ -0.55
IFT88-202ENST00000351808 ST8SIA3O43173 380 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 FGF17O60258 216 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 SLC16A7O60669 478 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 MPZL1O95297 269 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 CST5P28325 142 aaPredicted RBP11.61□□□□□ -0.55
IFT88-202ENST00000351808 CSNK1A1P48729 337 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 ZNF266Q14584 549 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 FAM189A2Q15884 450 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 CPEB2Q7Z5Q1 589 aaKnown RBP11.61□□□□□ -0.55
IFT88-202ENST00000351808 RAB42Q8N4Z0 105 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 GATSQ8NAP1 163 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 OR51G1Q8NGK1 321 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 PTPMT1Q8WUK0 201 aaPredicted RBP11.61□□□□□ -0.55
IFT88-202ENST00000351808 ZNF2Q9BSG1 426 aaPredicted RBP11.61□□□□□ -0.55
IFT88-202ENST00000351808 CRYM-AS1A6NIL9 109 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 BGLAPP02818 100 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 ZNF41P51814 821 aaPredicted RBP11.61□□□□□ -0.55
IFT88-202ENST00000351808 CHRFAM7AQ494W8 412 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 TMEM171Q8WVE6 324 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 LRIT1Q9P2V4 623 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 R4GMQ9 66 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 SFTPDP35247 375 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 ZNF93P35789 620 aaPredicted RBP11.61□□□□□ -0.55
IFT88-202ENST00000351808 GALR1P47211 349 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 CNN1P51911 297 aaKnown RBP11.61□□□□□ -0.55
IFT88-202ENST00000351808 FOXK1P85037 733 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms