RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 RBFOX1Q9NWB1 397 aaKnown RBP9.35□□□□□ -0.91
ECM1-201ENST00000346569 FZR1Q9UM11 496 aa9.35□□□□□ -0.91
ECM1-201ENST00000346569 MYO18BQ8IUG5 2567 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 LRP5LA4QPB2 252 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 TMEM235A6NFC5 223 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 FAM90A27PA6NNH2 459 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 PRSS44E7EML9 344 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 F8VVB4 439 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 F8VWA3 439 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 MFNGO00587 321 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 SYNGR1O43759 233 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 SSX4O60224 188 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 PLATP00750 562 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
ECM1-201ENST00000346569 HIST1H1DP16402 221 aaKnown RBP9.34□□□□□ -0.91
ECM1-201ENST00000346569 CPT2P23786 658 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 GRNP28799 593 aaKnown RBP9.34□□□□□ -0.91
ECM1-201ENST00000346569 KIR2DL3P43628 341 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 SORDQ00796 357 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 MAB21L1Q13394 359 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 OR8G1Q15617 311 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 RNASE12Q5GAN4 147 aaKnown RBP9.34□□□□□ -0.91
ECM1-201ENST00000346569 NHLRC3Q5JS37 347 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 NCMAPQ5T1S8 102 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 CCBE1Q6UXH8 406 aaPredicted RBP9.34□□□□□ -0.91
ECM1-201ENST00000346569 Q6ZTK2 550 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 RTN4RL2Q86UN3 420 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 C11orf53Q8IXP5 236 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 CHST4Q8NCG5 386 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 OR8S1Q8NH09 359 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 PRR7Q8TB68 274 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 RAB3CQ96E17 227 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 ARHGAP5-AS1Q96IT6 56 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 HS3ST6Q96QI5 342 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 C7orf50Q9BRJ6 194 aaKnown RBP9.34□□□□□ -0.91
ECM1-201ENST00000346569 RTL8AQ9BWD3 113 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 NGBQ9NPG2 151 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 KCNJ16Q9NPI9 418 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 NDRG3Q9UGV2 375 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 FLNCQ14315 2725 aa9.34□□□□□ -0.91
ECM1-201ENST00000346569 TMEM210A6NLX4 147 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 J3QT63 122 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 TIMM8AO60220 97 aaPredicted RBP9.33□□□□□ -0.92
ECM1-201ENST00000346569 CA11O75493 328 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 PTBP3O95758 552 aaKnown RBP9.33□□□□□ -0.92
ECM1-201ENST00000346569 ECDO95905 644 aaPredicted RBP9.33□□□□□ -0.92
ECM1-201ENST00000346569 LPLP06858 475 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 GSTT2BP0CG30 244 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 GNB3P16520 340 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 GNLYP22749 145 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 BLVRBP30043 206 aaPredicted RBP9.33□□□□□ -0.92
ECM1-201ENST00000346569 SLC6A1P30531 599 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 BTCP35070 178 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 INPP1P49441 399 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 ERVK11-1P61568 191 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 RPS23P62266 143 aaKnown RBP9.33□□□□□ -0.92
ECM1-201ENST00000346569 TLE1Q04724 770 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 BSPH1Q075Z2 132 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 ZNF154Q13106 437 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 PNLIPRP3Q17RR3 467 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 MZT2BQ6NZ67 158 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 HAGHLQ6PII5 290 aaPredicted RBP9.33□□□□□ -0.92
ECM1-201ENST00000346569 FBXL14Q8N1E6 418 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 SCCPDHQ8NBX0 429 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 LINC01560Q8TB33 94 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 CA5BP1Q8WTZ4 195 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 DEDD2Q8WXF8 326 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 ST8SIA4Q92187 359 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 SLAMF9Q96A28 289 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 CYYR1Q96J86 154 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 RADILQ96JH8 1075 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 ADAT1Q9BUB4 502 aaKnown RBP9.33□□□□□ -0.92
ECM1-201ENST00000346569 PECRQ9BY49 303 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 MRPL37Q9BZE1 423 aaKnown RBP9.33□□□□□ -0.92
ECM1-201ENST00000346569 TLNRD1Q9H1K6 362 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 CXXC4Q9H2H0 198 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 RHOFQ9HBH0 211 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 MSL2Q9HCI7 577 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 HRASLSQ9HDD0 168 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 ZNF107Q9UII5 783 aaPredicted RBP9.33□□□□□ -0.92
ECM1-201ENST00000346569 DUSP13Q9UII6 198 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 HSF4Q9ULV5 492 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 ST3GAL6Q9Y274 331 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 CACNG2Q9Y698 323 aa9.33□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A10PA6NDY2 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A18PA6NE21 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A16PA6NEW6 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A20PA6NIJ5 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A8PA6NJQ4 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A7PA6NKC0 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A22PA8MWA6 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A12PA8MX19 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A5PA8MXJ8 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A23PA8MXZ1 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 ABCD4O14678 606 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 SSX5O60225 188 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 NOS1APO75052 506 aaPredicted RBP9.32□□□□□ -0.92
ECM1-201ENST00000346569 RHBDL1O75783 438 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A15PP0C7V4 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A13PP0C7W8 464 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms