RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 B4E171 279 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 IFNA1P01562 189 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CTSDP07339 412 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CT45A8P0DMV1 189 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CT45A9P0DMV2 189 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 PNMTP11086 282 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 HIST1H1DP16402 221 aaKnown RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF41P51814 821 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 RAB38P57729 211 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 UBE2NP61088 152 aaKnown RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 GNMTQ14749 295 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CT45A2Q5DJT8 189 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ASPHD2Q6ICH7 369 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SPSB3Q6PJ21 355 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 PLXDC2Q6UX71 529 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF66Q6ZN08 573 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 NUP54Q7Z3B4 507 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SULF2Q8IWU5 870 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CISD2Q8N5K1 135 aaKnown RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 C2orf73Q8N5S3 287 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 OR2L3Q8NG85 312 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CLDND2Q8NHS1 167 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SPPL3Q8TCT6 385 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 KCNE4Q8WWG9 221 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SLC35E1Q96K37 410 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SLC22A12Q96S37 553 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SERINC1Q9NRX5 453 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 TM7SF3Q9NS93 570 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 A0A1W2PPV9 198 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CLEC18AA5D8T8 446 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF705FA8MVS1 300 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ST8SIA3O43173 380 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 C1QL1O75973 258 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 MMP7P09237 267 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF705DP0CH99 300 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF705BP0CI00 300 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 GNB3P16520 340 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF43P17038 809 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF10P21506 573 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 PSMB5P28074 263 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 DUSP1P28562 367 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CHRNB4P30926 498 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 THPOP40225 353 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 BCL6P41182 706 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ACAA2P42765 397 aaKnown RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 GPR1P46091 355 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 PTTG1IPP53801 180 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 EMP2P54851 167 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 MTCP1P56278 107 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SLC37A1P57057 533 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 DLX2Q07687 328 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 IL24Q13007 206 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 MEP1BQ16820 701 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 HYAL4Q2M3T9 481 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ACTL10Q5JWF8 245 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ETFRF1Q6IPR1 90 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SLC24A5Q71RS6 500 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 LYPD6Q86Y78 171 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF100Q8IYN0 542 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CLEC18CQ8NCF0 446 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 OR4D6Q8NGJ1 314 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 PTPMT1Q8WUK0 201 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 OIT3Q8WWZ8 545 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ZCCHC14Q8WYQ9 949 aaKnown RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ABHD14BQ96IU4 210 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SH3BGRL3Q9H299 93 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 ELL3Q9HB65 397 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CAPN10Q9HC96 672 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CISD1Q9NZ45 108 aaKnown RBP7.17□□□□□ -1.26
ATG4A-201ENST00000343524 FOXJ2Q9P0K8 574 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 CD207Q9UJ71 328 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 SCN5AQ14524 2016 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 LOC107986453A0A1B0GWG9 222 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF732B4DXR9 585 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 CA11O75493 328 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 NXPH2O95156 264 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 OR6A2O95222 327 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 SYNGR4O95473 234 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 TDGF1P13385 188 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 CPMP14384 443 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 CTXN1P60606 82 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 QRFPP83859 136 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 TRA2AQ13595 282 aaKnown RBP eCLIP7.16□□□□□ -1.26
ATG4A-201ENST00000343524 SLC22A6Q4U2R8 563 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 CLLU1OSQ5K130 101 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 FHL5Q5TD97 284 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 SLC8B1Q6J4K2 584 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 H1FOOQ8IZA3 346 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-201ENST00000343524 MAML2Q8IZL2 1156 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-201ENST00000343524 OR13G1Q8NGZ3 307 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 KCNG3Q8TAE7 436 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 MOB3AQ96BX8 217 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 NUS1Q96E22 293 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 THOC3Q96J01 351 aaKnown RBP7.16□□□□□ -1.26
ATG4A-201ENST00000343524 TP53RKQ96S44 253 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 SERINC2Q96SA4 455 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 AICDAQ9GZX7 198 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 WFDC1Q9HC57 220 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 SDF2L1Q9HCN8 221 aa7.16□□□□□ -1.26
ATG4A-201ENST00000343524 SRA1Q9HD15 236 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms