RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ACTBL2Q562R1 376 aa17.16■□□□□ 0.34
RTN1-202ENST00000342503 ATPAF1Q5TC12 328 aaPredicted RBP17.16■□□□□ 0.34
RTN1-202ENST00000342503 SEZ6L2Q6UXD5 910 aa17.16■□□□□ 0.34
RTN1-202ENST00000342503 FBXW12Q6X9E4 464 aa17.16■□□□□ 0.34
RTN1-202ENST00000342503 BHLHA15Q7RTS1 189 aaPredicted RBP17.16■□□□□ 0.34
RTN1-202ENST00000342503 CAPSLQ8WWF8 208 aa17.16■□□□□ 0.34
RTN1-202ENST00000342503 MRGPRFQ96AM1 343 aa17.16■□□□□ 0.34
RTN1-202ENST00000342503 FAAP24Q9BTP7 215 aa17.16■□□□□ 0.34
RTN1-202ENST00000342503 HSF4Q9ULV5 492 aa17.16■□□□□ 0.34
RTN1-202ENST00000342503 SPTBN2O15020 2390 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 AMY2BP19961 511 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 CHATP28329 748 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 ERVS71-1P61550 626 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 C3P1Q6ZMU1 363 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 BEND4Q6ZU67 534 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 TMED4Q7Z7H5 227 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 C17orf78Q8N4C9 275 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 Q8NA96 180 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 MAFIPQ8WZ33 124 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 EMG1Q92979 244 aaKnown RBP17.15■□□□□ 0.34
RTN1-202ENST00000342503 SLAMF9Q96A28 289 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 OR2J1Q9GZK6 312 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 ALX4Q9H161 411 aaPredicted RBP17.15■□□□□ 0.34
RTN1-202ENST00000342503 VSIG4Q9Y279 399 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 APC2O95996 2303 aa17.15■□□□□ 0.34
RTN1-202ENST00000342503 BCL3P20749 454 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 ERP29P30040 261 aaKnown RBP17.14■□□□□ 0.33
RTN1-202ENST00000342503 TIMP3P35625 211 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 SNU13P55769 128 aaKnown RBP17.14■□□□□ 0.33
RTN1-202ENST00000342503 UCP2P55851 309 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 RBM11P57052 281 aaKnown RBP17.14■□□□□ 0.33
RTN1-202ENST00000342503 EIF2S3LQ2VIR3 472 aaKnown RBP17.14■□□□□ 0.33
RTN1-202ENST00000342503 VAX1Q5SQQ9 334 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 SAXO1Q8IYX7 474 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 SLC25A40Q8TBP6 338 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 CCDC107Q8WV48 283 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 HDHD3Q9BSH5 251 aaPredicted RBP17.14■□□□□ 0.33
RTN1-202ENST00000342503 ZNF436Q9C0F3 470 aaPredicted RBP17.14■□□□□ 0.33
RTN1-202ENST00000342503 MGAT4CQ9UBM8 478 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 AK3Q9UIJ7 227 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 MGAQ8IWI9 3026 aa17.14■□□□□ 0.33
RTN1-202ENST00000342503 CA6P23280 308 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 TDGF1P3P51864 188 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 C4orf46Q504U0 113 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 MUC20Q8N307 709 aaPredicted RBP17.13■□□□□ 0.33
RTN1-202ENST00000342503 SPICQ8N5J4 248 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 CISD2Q8N5K1 135 aaKnown RBP17.13■□□□□ 0.33
RTN1-202ENST00000342503 Q8NFD4 153 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 OR10AD1Q8NGE0 317 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 OR1J1Q8NGS3 322 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 OR5H2Q8NGV7 314 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 SULT4A1Q9BR01 284 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 TRAF4Q9BUZ4 470 aaPredicted RBP17.13■□□□□ 0.33
RTN1-202ENST00000342503 BOLA1Q9Y3E2 137 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 NPTNQ9Y639 398 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 UBE2QL1A1L167 161 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 OR2AT4A6NND4 320 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 MSTNO14793 375 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 OR4E1P0C645 316 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 PDCD1Q15116 288 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 NLRC3Q7RTR2 1065 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 ZDHHC22Q8N966 263 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 MYOZ1Q9NP98 299 aaPredicted RBP17.13■□□□□ 0.33
RTN1-202ENST00000342503 OBP2BQ9NPH6 170 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 DLL4Q9NR61 685 aa17.13■□□□□ 0.33
RTN1-202ENST00000342503 OR5B21A6NL26 309 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 ZNF35P13682 527 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 ESPL1Q14674 2120 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 BRICD5Q6PL45 260 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 ZNF474Q6S9Z5 364 aaPredicted RBP17.12■□□□□ 0.33
RTN1-202ENST00000342503 C17orf107Q6ZR85 190 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 TMEM200AQ86VY9 491 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 MKXQ8IYA7 352 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 ZNF431Q8TF32 576 aaPredicted RBP17.12■□□□□ 0.33
RTN1-202ENST00000342503 PLSCR3Q9NRY6 295 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 CA10Q9NS85 328 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 ZNF701Q9NV72 531 aaPredicted RBP17.12■□□□□ 0.33
RTN1-202ENST00000342503 MTCH1Q9NZJ7 389 aa17.12■□□□□ 0.33
RTN1-202ENST00000342503 OR5H1A6NKK0 313 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 F8VVB4 439 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 F8VWA3 439 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 SYNGR1O43759 233 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 HOXD4P09016 255 aaPredicted RBP17.11■□□□□ 0.33
RTN1-202ENST00000342503 CECR9P0C854 216 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 CEACAM8P31997 349 aaPredicted RBP17.11■□□□□ 0.33
RTN1-202ENST00000342503 TMPRSS3P57727 454 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 TAS2R46P59540 309 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 UBE2MP61081 183 aaKnown RBP17.11■□□□□ 0.33
RTN1-202ENST00000342503 GNG3P63215 75 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 IFITM2Q01629 132 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 IGFBP7Q16270 282 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 ELP2Q6IA86 826 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 DYRK2Q92630 601 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 AMDHD2Q9Y303 409 aa17.11■□□□□ 0.33
RTN1-202ENST00000342503 IGKV1D-8A0A087WSZ0 117 aa17.1■□□□□ 0.33
RTN1-202ENST00000342503 PDCD6O75340 191 aa17.1■□□□□ 0.33
RTN1-202ENST00000342503 IGLV1-44P01699 117 aa17.1■□□□□ 0.33
RTN1-202ENST00000342503 GLI4P10075 376 aa17.1■□□□□ 0.33
RTN1-202ENST00000342503 RAC2P15153 192 aa17.1■□□□□ 0.33
RTN1-202ENST00000342503 OR3A3P47888 321 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms