RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 LRRN1Q6UXK5 716 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 OR2Z1Q8NG97 314 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 OR2AE1Q8NHA4 323 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 THEM6Q8WUY1 208 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 ASB17Q8WXJ9 295 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 OR8B4Q96RC9 309 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 FKBP14Q9NWM8 211 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 CLN6Q9NWW5 311 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 LRP12Q9Y561 859 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 CACNG2Q9Y698 323 aa8.64□□□□□ -1.03
TPM3-207ENST00000341372 A0A0B4J293 547 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 hCG_38984A0A1B0GV85 526 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 SMIM31A0A1B0GVY4 71 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 CD300LBA8K4G0 201 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 CLDN25C9JDP6 229 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 F5H697 171 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 PHYHO14832 338 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 ZNF254O75437 659 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 HCCSP53701 268 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 RIPPLY3P57055 190 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 CD300EQ496F6 205 aaPredicted RBP8.63□□□□□ -1.03
TPM3-207ENST00000341372 HIST2H2BDQ6DRA6 164 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 DOK3Q7L591 496 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 SLC35F2Q8IXU6 374 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 OR2V2Q96R30 315 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 SLC22A4Q9H015 551 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 RGCCQ9H4X1 137 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 PLCXD1Q9NUJ7 323 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 ZNF319Q9P2F9 582 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 NIPBLQ6KC79 2804 aaeCLIP8.63□□□□□ -1.036e-7■■■□□ 15
TPM3-207ENST00000341372 ACOD1A6NK06 481 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 CDC14BO60729 498 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 CFL1P23528 166 aaKnown RBP8.63□□□□□ -1.03
TPM3-207ENST00000341372 TAGLN2P37802 199 aaKnown RBP8.63□□□□□ -1.03
TPM3-207ENST00000341372 DDOSTP39656 456 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 CD200P41217 278 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 FAM3AP98173 230 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 EMX1Q04741 257 aaPredicted RBP8.63□□□□□ -1.03
TPM3-207ENST00000341372 SLC3A1Q07837 685 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 DOC2BQ14184 412 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 OR8B8Q15620 311 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 TMEM182Q6ZP80 229 aaPredicted RBP8.63□□□□□ -1.03
TPM3-207ENST00000341372 FAM57BQ71RH2 274 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 CDH26Q8IXH8 852 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 ZNF679Q8IYX0 411 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 RFLNBQ8N5W9 214 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 BHLHE23Q8NDY6 225 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 OR10AD1Q8NGE0 317 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 OR52M1Q8NGK5 317 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 ITLN1Q8WWA0 313 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 GGHQ92820 318 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 RFKQ969G6 155 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 DGCR14Q96DF8 476 aaKnown RBP8.63□□□□□ -1.03
TPM3-207ENST00000341372 MMP27Q9H306 513 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 AMBNQ9NP70 447 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 TRIM36Q9NQ86 728 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 TMEM100Q9NV29 134 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 FAM206AQ9NX38 181 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 IMPAD1Q9NX62 359 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 DNAJC27Q9NZQ0 273 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 PSORS1C1Q9UIG5 152 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 ZNF391Q9UJN7 358 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 NOP16Q9Y3C1 178 aaKnown RBP8.63□□□□□ -1.03
TPM3-207ENST00000341372 PCDHGB1Q9Y5G3 927 aa8.63□□□□□ -1.03
TPM3-207ENST00000341372 LRP5LA4QPB2 252 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 H0YL77 283 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 MAGEB3O15480 346 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 PPIHO43447 177 aaKnown RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 SRSF10O75494 262 aaKnown RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 IGLV3-1P01715 115 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 MBPP02686 304 aaPredicted RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 MT-ND2P03891 347 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 EEF1B2P24534 225 aaKnown RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 GDNFP39905 211 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 NEDD8Q15843 81 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 ZNF181Q2M3W8 571 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 CDONQ4KMG0 1287 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 MEDAGQ5VYS4 303 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 ZNF322Q6U7Q0 402 aaPredicted RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 Q71RC1 249 aaPredicted RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 OR51G2Q8NGK0 314 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 CLDND2Q8NHS1 167 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 ITFG2Q969R8 447 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 SGK3Q96BR1 496 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 REEP6Q96HR9 211 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 FYTTD1Q96QD9 318 aaKnown RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 MROQ9BYG7 248 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 NAA50Q9GZZ1 169 aaKnown RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 FAM212BQ9NTI7 297 aaPredicted RBP8.62□□□□□ -1.03
TPM3-207ENST00000341372 TMEM106BQ9NUM4 274 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 WIPI2Q9Y4P8 454 aa8.62□□□□□ -1.03
TPM3-207ENST00000341372 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
TPM3-207ENST00000341372 ZNF670-ZNF695F2Z2N8 137 aa8.61□□□□□ -1.03
TPM3-207ENST00000341372 GMDSO60547 372 aa8.61□□□□□ -1.03
TPM3-207ENST00000341372 RLN1P04808 185 aa8.61□□□□□ -1.03
TPM3-207ENST00000341372 OR2T7P0C7T2 308 aa8.61□□□□□ -1.03
TPM3-207ENST00000341372 C21orf33P30042 268 aaPredicted RBP8.61□□□□□ -1.03
TPM3-207ENST00000341372 IL2RGP31785 369 aa8.61□□□□□ -1.03
TPM3-207ENST00000341372 MAP2K4P45985 399 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms