RNA–Protein interactions for RNA: ENST00000338895.7

DFFB-201, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 2 BASIC

Gene DFFB, Length 3,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-201ENST00000338895 F12P00748 615 aaPredicted RBP11.34□□□□□ -0.59
DFFB-201ENST00000338895 NPBWR2P48146 333 aa11.34□□□□□ -0.59
DFFB-201ENST00000338895 ABCA11PQ4W5N1 156 aa11.34□□□□□ -0.59
DFFB-201ENST00000338895 SLC7A10Q9NS82 523 aa11.34□□□□□ -0.59
DFFB-201ENST00000338895 RASL12Q9NYN1 266 aa11.34□□□□□ -0.59
DFFB-201ENST00000338895 MED19A0JLT2 244 aaPredicted RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 ZNF716A6NP11 495 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 RCC1P18754 421 aaPredicted RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 PTGER4P35408 488 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 GSK3AP49840 483 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 TRA2AQ13595 282 aaKnown RBP eCLIP11.33□□□□□ -0.6
DFFB-201ENST00000338895 RAB35Q15286 201 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 SLC22A25Q6T423 547 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 MEX3BQ6ZN04 569 aaKnown RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 CALHM1Q8IU99 346 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 BPIFCQ8NFQ6 507 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 MRPS24Q96EL2 167 aaKnown RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 OCSTAMPQ9BR26 566 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 RNF126Q9BV68 326 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 V9GYS6 101 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 IGKV1-12A0A0C4DH73 117 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 XRCC2O43543 280 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 NXPH3O95157 252 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 FARS2O95363 451 aaKnown RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 IGKV1D-12P01611 117 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 APOC1P02654 83 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 TBPP20226 339 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 CNR1P21554 472 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 FPR2P25090 351 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 ASCL1P50553 236 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 PAN3Q58A45 887 aaKnown RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 RPUSD3Q6P087 351 aaKnown RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 TMEM88Q6PEY1 159 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 CPEB3Q8NE35 698 aaKnown RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 EMG1Q92979 244 aaKnown RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 OR2H1Q9GZK4 316 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 LIME1Q9H400 295 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 PARPBPQ9NWS1 579 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 IL17BQ9UHF5 180 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 TIMM10BQ9Y5J6 103 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 HOXD4P09016 255 aaPredicted RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 ICAM2P13598 275 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 PRKACBP22694 351 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 PIGPP57054 158 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 ARF1P84077 181 aaKnown RBP11.33□□□□□ -0.6
DFFB-201ENST00000338895 PNLIPRP3Q17RR3 467 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 VAX1Q5SQQ9 334 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 OVCH2Q7RTZ1 564 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 OR11L1Q8NGX0 322 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 WNT5BQ9H1J7 359 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 GPR35Q9HC97 309 aa11.33□□□□□ -0.6
DFFB-201ENST00000338895 CADP27708 2225 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 A0A1W2PR80 420 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 SERPINE3A8MV23 424 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 ZNF705EA8MWA4 302 aaPredicted RBP11.32□□□□□ -0.6
DFFB-201ENST00000338895 BET1O15155 118 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 PPIAP62937 165 aaKnown RBP11.32□□□□□ -0.6
DFFB-201ENST00000338895 SPATA46Q5T0L3 261 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 IL22RA1Q8N6P7 574 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 LRRC46Q96FV0 321 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 MARS2Q96GW9 593 aaKnown RBP11.32□□□□□ -0.6
DFFB-201ENST00000338895 STRADBQ9C0K7 418 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 C12orf4Q9NQ89 552 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 SLC7A11Q9UPY5 501 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 C9orf172C9J069 976 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 NME2P22392 152 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 FCGR2CP31995 323 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 GPM6AP51674 278 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 ZNF239Q16600 458 aaKnown RBP11.32□□□□□ -0.6
DFFB-201ENST00000338895 SPIN3Q5JUX0 258 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 SGPP2Q8IWX5 399 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 OR10AD1Q8NGE0 317 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 PSMF1Q92530 271 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 MRPL24Q96A35 216 aaKnown RBP11.32□□□□□ -0.6
DFFB-201ENST00000338895 SH2D2AQ9NP31 389 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 MYOZ1Q9NP98 299 aaPredicted RBP11.32□□□□□ -0.6
DFFB-201ENST00000338895 TREM1Q9NP99 234 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 IL36RNQ9UBH0 155 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 ANXA10Q9UJ72 324 aa11.32□□□□□ -0.6
DFFB-201ENST00000338895 A8MXK9 166 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 KRBOX1C9JBD0 128 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 IFNA2P01563 188 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 FGF2P09038 288 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 TDGF1P13385 188 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 CRYGSP22914 178 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 OTX1P32242 354 aaPredicted RBP11.31□□□□□ -0.6
DFFB-201ENST00000338895 ID4P47928 161 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 SRSF3P84103 164 aaKnown RBP11.31□□□□□ -0.6
DFFB-201ENST00000338895 ACTBL2Q562R1 376 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 FAM89BQ8N5H3 189 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 SUMF1Q8NBK3 374 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 OR56B2PQ8NGI1 322 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 Q96M66 194 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 DEFB127Q9H1M4 99 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 SLC25A32Q9H2D1 315 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 FBLN5Q9UBX5 448 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 ARPC4-TTLL3A0A0A6YYG9 625 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 A0A1B0GW55 424 aa11.31□□□□□ -0.6
DFFB-201ENST00000338895 FIGNL2A6NMB9 653 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms