RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 MMP28Q9H239 520 aa12.58□□□□□ -0.4
SYNGR1-203ENST00000328933 RBMX2Q9Y388 322 aaKnown RBP12.58□□□□□ -0.4
SYNGR1-203ENST00000328933 IGHV3-43A0A0B4J1X8 118 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 A0A0G2JMP0 313 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 A0A1B0GV50 99 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 IGHV3-43DP0DP04 118 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 RBMS2Q15434 407 aaKnown RBP12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 PDLIM3Q53GG5 364 aaPredicted RBP12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 Q6ZS92 163 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 OR4M2Q8NGB6 313 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 PTDSS2Q9BVG9 487 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 ANKHD1Q8IWZ3 2542 aaKnown RBP12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 CENPFP49454 3210 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 J3QT63 122 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 CEACAM3P40198 252 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 CDONQ4KMG0 1287 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 SHEQ5VZ18 495 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 PARP16Q8N5Y8 322 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 AKR1E2Q96JD6 320 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 HEXA-AS1Q9H8Q6 139 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 PLEKHB1Q9UF11 243 aaPredicted RBP12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 PURGQ9UJV8 347 aaKnown RBP12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 FOXJ3Q9UPW0 622 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 M0R1X1 148 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 CDK2AP1O14519 115 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 SYNGR3O43761 229 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 ZNF354AO60765 605 aaPredicted RBP12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 RPS4Y1P22090 263 aaKnown RBP12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 DLX5P56178 289 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 Q0VFX4 171 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 KCNK17Q96T54 332 aa12.57□□□□□ -0.4
SYNGR1-203ENST00000328933 IL7P13232 177 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 PSMB1P20618 241 aaKnown RBP12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 AKR1C1Q04828 323 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 OR52W1Q6IF63 320 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 C8orf82Q6P1X6 216 aaPredicted RBP12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 CDC20BQ86Y33 519 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 C1orf174Q8IYL3 243 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 OR6C3Q9NZP0 311 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 DSPPQ9NZW4 1301 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 IGKV1D-42A0A075B6H8 117 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 OMGP23515 440 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 ARHGEF39Q8N4T4 335 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 POC1BQ8TC44 478 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 AIFM2Q9BRQ8 373 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 ZNF665Q9H7R5 613 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 GCM1Q9NP62 436 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 NXPH3O95157 252 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 MT-CO2P00403 227 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 NAT2P11245 290 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 CD80P33681 288 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 NR4A2P43354 598 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 OR3A1P47881 315 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 PRRX1P54821 245 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 GP2P55259 537 aaKnown RBP12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 ACSM1Q08AH1 577 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 NHLRC1Q6VVB1 395 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 DCUN1D4Q92564 292 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 RANBP3Q9H6Z4 567 aaPredicted RBP12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 NUBP2Q9Y5Y2 271 aa12.56□□□□□ -0.4
SYNGR1-203ENST00000328933 NUDT19A8MXV4 375 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 NPIPB9F8W1W9 429 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 MMP16P51512 607 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 SRPXP78539 464 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 OR52I2Q8NH67 350 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 FYTTD1Q96QD9 318 aaKnown RBP12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 ZNF629Q9UEG4 869 aaPredicted RBP12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 LRP5LA4QPB2 252 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 PI3P19957 117 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 SLC25A46Q96AG3 418 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 RFPL4AA6NLU0 287 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 RFPL4AL1F8VTS6 287 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 EPXP11678 715 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 BRS3P32247 399 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 EGR4Q05215 589 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 INSL4Q14641 139 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 STUMQ69YW2 141 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 SLC25A47Q6Q0C1 308 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 OR5A2Q8NGI9 324 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 PIMREGQ9BSJ6 248 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 FAAP24Q9BTP7 215 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 CA10Q9NS85 328 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 F2RL2O00254 374 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 GMDSO60547 372 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 CPN1P15169 458 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 ELK1P19419 428 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 NFYAP23511 347 aaPredicted RBP12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 LHX2P50458 406 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 NAAAQ02083 359 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 MFGE8Q08431 387 aaPredicted RBP12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 SIAH3Q8IW03 269 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 OR51S1Q8NGJ8 323 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 DIRC2Q96SL1 478 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 SMIM3Q9BZL3 60 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 SLC52A3Q9NQ40 469 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 DLL4Q9NR61 685 aa12.55□□□□□ -0.4
SYNGR1-203ENST00000328933 SERPINE3A8MV23 424 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 CDRT15L2A8MXV6 281 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms