RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 OR10J1P30954 320 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 CLPPQ16740 277 aaPredicted RBP15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 RSRP1Q9BUV0 290 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 FBXO4Q9UKT5 387 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 B9D1Q9UPM9 204 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 C3orf85A0A1B0GTC6 90 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 LEUTXA8MZ59 168 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 PYCR3Q53H96 274 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 OR1L1Q8NH94 360 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 TBC1D29Q9UFV1 150 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 K7ERU9 68 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 PDPNQ86YL7 162 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 ANGPTL4Q9BY76 406 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 P4HTMQ9NXG6 502 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 THAP10Q9P2Z0 257 aaPredicted RBP15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 ZNF716A6NP11 495 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 NOVP48745 357 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 FUT7Q11130 342 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 OR5AU1Q8NGC0 362 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 OR10A7Q8NGE5 316 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 UFC1Q9Y3C8 167 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 HCFC2Q9Y5Z7 792 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 PDE6DO43924 150 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 DEFB103AP81534 67 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 MED29Q9NX70 200 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 SPTBN1Q01082 2364 aaKnown RBP15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 AWAT1Q58HT5 328 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 HSD17B13Q7Z5P4 300 aaPredicted RBP15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 TGIF2LXQ8IUE1 241 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 SLC25A22Q9H936 323 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 COL22A1Q8NFW1 1626 aaPredicted RBP15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 DHRS3O75911 302 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 CD27P26842 260 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 XAF1Q6GPH4 301 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 ZNF343Q6P1L6 599 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 ARHGAP5-AS1Q96IT6 56 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 TRAF4Q9BUZ4 470 aaPredicted RBP15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 NAGKQ9UJ70 344 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 IGHV3-20A0A0C4DH32 117 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 INPP5JQ15735 1006 aaPredicted RBP15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 BPIFA4PQ86YQ2 179 aa15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 ZNF552Q9H707 407 aaPredicted RBP15.13■□□□□ 0.01
SMCHD1-201ENST00000320876 UPK1AO00322 258 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 HIST1H1DP16402 221 aaKnown RBP15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 HLA-DRB3P79483 266 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 A0A1W2PNR3 127 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 C1QTNF6Q9BXI9 259 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 TBX19O60806 448 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 HLA-BQ31612 363 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 SLC16A13Q7RTY0 426 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 IL20Q9NYY1 176 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 IGHV3-64DA0A0J9YX35 117 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 C11orf94C9JXX5 98 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 MRPL37Q9BZE1 423 aaKnown RBP15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 PLEKHB1Q9UF11 243 aaPredicted RBP15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 SFT2D2O95562 160 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 PTOV1Q86YD1 416 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 ALPK2Q86TB3 2170 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 FGF8P55075 233 aaPredicted RBP15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 RGS7BPQ6MZT1 257 aaPredicted RBP15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 TP53RKQ96S44 253 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 RNF2Q99496 336 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 TMPRSS11DO60235 418 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 HLA-GP17693 338 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 DHRS13Q6UX07 377 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 ETV3LQ6ZN32 361 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 LSMEM1Q8N8F7 131 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 ONECUT1Q9UBC0 465 aa15.12■□□□□ 0.01
SMCHD1-201ENST00000320876 FAM53BQ14153 422 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 MRGPREQ86SM8 312 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 OR5A2Q8NGI9 324 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 VN1R1Q9GZP7 353 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 CACNG5Q9UF02 275 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 SLC22A20A6NK97 555 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 SOX15O60248 233 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 B3GALT4O96024 378 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 LIMK1P53667 647 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 DUSP2Q05923 314 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 ANKLE1Q8NAG6 615 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 OR10G4Q8NGN3 311 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 OR10G9Q8NGN4 311 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 OR10G7Q8NGN6 311 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 NUDT8Q8WV74 236 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 ISLRO14498 428 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 ACP1P24666 158 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 SLC35E4Q6ICL7 350 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 ING1Q9UK53 422 aaPredicted RBP15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 OR5AC1P0C628 307 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 ZNF25P17030 456 aaPredicted RBP15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 PTGFRP43088 359 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 CA13Q8N1Q1 262 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 OR52L2PQ8NGH6 319 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 UBALD1Q8TB05 177 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 PGA4P0DJD7 388 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 PGA5P0DJD9 388 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 CAMPP49913 170 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 KISS1Q15726 138 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 STPG2Q8N412 459 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 OR2C3Q8N628 320 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 OR2T8A6NH00 312 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms