RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 SLC22A8Q8TCC7 542 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 SAT2Q96F10 170 aaPredicted RBP13.04□□□□□ -0.32
TFE3-201ENST00000315869 ZNF385AQ96PM9 386 aaKnown RBP13.04□□□□□ -0.32
TFE3-201ENST00000315869 ULBP2Q9BZM5 246 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 ZNF700Q9H0M5 742 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 RARRES3Q9UL19 164 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
TFE3-201ENST00000315869 FRYQ5TBA9 3013 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 BORCS7-ASMTA0A0B4J1R7 106 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 A6NLC8 198 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 ZNHIT1O43257 154 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 JTBO76095 146 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 CELA2AP08217 269 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 ZNF728P0DKX0 622 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 CD37P11049 281 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 ZNF44P15621 663 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 ZNF528Q3MIS6 628 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 FAM213BQ8TBF2 198 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 BSCL2Q96G97 398 aaPredicted RBP13.04□□□□□ -0.32
TFE3-201ENST00000315869 PIGQQ9BRB3 760 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 IFT22Q9H7X7 185 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 FAM212BQ9NTI7 297 aaPredicted RBP13.04□□□□□ -0.32
TFE3-201ENST00000315869 DNAJB11Q9UBS4 358 aa13.04□□□□□ -0.32
TFE3-201ENST00000315869 NUDT19A8MXV4 375 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 H3BMH7 237 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 OR5AC1P0C628 307 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 SUMO3P55854 103 aaPredicted RBP13.03□□□□□ -0.32
TFE3-201ENST00000315869 DCDP81605 110 aaKnown RBP13.03□□□□□ -0.32
TFE3-201ENST00000315869 PMS2CLQ68D20 193 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 FBXW12Q6X9E4 464 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 RBMS3Q6XE24 437 aaKnown RBP13.03□□□□□ -0.32
TFE3-201ENST00000315869 LYZL2Q7Z4W2 148 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 RTN4IP1Q8WWV3 396 aaPredicted RBP13.03□□□□□ -0.32
TFE3-201ENST00000315869 CCDC74BQ96LY2 380 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 RAB33BQ9H082 229 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 NIT2Q9NQR4 276 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 hCG_1809904A0A1W2PP81 198 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 A0A1W2PR64 198 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 A0A1W2PRV1 198 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 SLC25A47Q6Q0C1 308 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 OR6X1Q8NH79 312 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 IP6K3Q96PC2 410 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 ZNF407Q9C0G0 2248 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 PRSS44E7EML9 344 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 TAAR5O14804 337 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 EIF2S3LQ2VIR3 472 aaKnown RBP13.03□□□□□ -0.32
TFE3-201ENST00000315869 TMEM156Q8N614 296 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 ZNF442Q9H7R0 627 aa13.03□□□□□ -0.32
TFE3-201ENST00000315869 A0A1W2PPH5 198 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 SERPINE3A8MV23 424 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 PHF1O43189 567 aaPredicted RBP13.02□□□□□ -0.32
TFE3-201ENST00000315869 EIF3GO75821 320 aaKnown RBP eCLIP13.02□□□□□ -0.32
TFE3-201ENST00000315869 CCL4P13236 92 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 DVL1P1P54792 670 aaPredicted RBP13.02□□□□□ -0.32
TFE3-201ENST00000315869 AWAT1Q58HT5 328 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 NEK7Q8TDX7 302 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 SAP25Q8TEE9 199 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 BORCS8Q96FH0 119 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 LYZL4Q96KX0 146 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 KCNJ16Q9NPI9 418 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 PILRBQ9UKJ0 227 aa13.02□□□□□ -0.32
TFE3-201ENST00000315869 LY6G6EA0A0G2JKS1 128 aa13.02□□□□□ -0.33
TFE3-201ENST00000315869 IGHV5-10-1A0A0J9YXX1 117 aa13.02□□□□□ -0.33
TFE3-201ENST00000315869 DHRS3O75911 302 aa13.02□□□□□ -0.33
TFE3-201ENST00000315869 CCNOP22674 350 aa13.02□□□□□ -0.33
TFE3-201ENST00000315869 MSX1P28360 303 aa13.02□□□□□ -0.33
TFE3-201ENST00000315869 SULT1A2P50226 295 aa13.02□□□□□ -0.33
TFE3-201ENST00000315869 RHBDD2Q6NTF9 364 aa13.02□□□□□ -0.33
TFE3-201ENST00000315869 PLXDC2Q6UX71 529 aa13.02□□□□□ -0.33
TFE3-201ENST00000315869 TMEM182Q6ZP80 229 aaPredicted RBP13.02□□□□□ -0.33
TFE3-201ENST00000315869 NAA11Q9BSU3 229 aaPredicted RBP13.02□□□□□ -0.33
TFE3-201ENST00000315869 U3KQA8 63 aa13.02□□□□□ -0.33
TFE3-201ENST00000315869 F10P00742 488 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 RD3LP0DJH9 198 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 HERV-K104P61576 105 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 SLC35A1P78382 337 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 GUK1Q16774 197 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 SLC22A25Q6T423 547 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 UBALD2Q8IYN6 164 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 ZNF837Q96EG3 531 aaPredicted RBP13.01□□□□□ -0.33
TFE3-201ENST00000315869 RASL10BQ96S79 203 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 METTL9Q9H1A3 318 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 DKKL1Q9UK85 242 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 RCL1Q9Y2P8 373 aaKnown RBP13.01□□□□□ -0.33
TFE3-201ENST00000315869 OR2M3Q8NG83 312 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 OR11L1Q8NGX0 322 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 SPACA9Q96E40 222 aaPredicted RBP13.01□□□□□ -0.33
TFE3-201ENST00000315869 SMIM8Q96KF7 97 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 LUZP4Q9P127 313 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 C7orf77A4D0Y5 90 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 UMAD1C9J7I0 102 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 TP53I11O14683 189 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 OR7C1O76099 320 aaPredicted RBP13.01□□□□□ -0.33
TFE3-201ENST00000315869 SPINK2P20155 84 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 PTAFRP25105 342 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 NOVA1P51513 510 aaKnown RBP13.01□□□□□ -0.33
TFE3-201ENST00000315869 NHLH2Q02577 135 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 SNAI3Q3KNW1 292 aa13.01□□□□□ -0.33
TFE3-201ENST00000315869 OPN5Q6U736 354 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms